Miyakogusa Predicted Gene

Lj0g3v0206129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206129.1 tr|Q0DT18|Q0DT18_ORYSJ Os03g0275300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g02753,69.86,3e-18,Ankyrin repeat,Ankyrin repeat-containing
domain; RING/U-box,NULL; seg,NULL; ZF_RING_2,Zinc finger,
R,CUFF.13226.1
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g38610.1                                                       273   1e-73
Glyma08g47310.1                                                       267   6e-72
Glyma15g04410.1                                                       185   3e-47
Glyma13g41040.2                                                       184   6e-47
Glyma13g41040.1                                                       183   2e-46
Glyma12g06850.1                                                       181   6e-46
Glyma11g14900.1                                                       174   9e-44
Glyma08g42740.1                                                       125   4e-29
Glyma09g26560.1                                                        53   3e-07
Glyma16g32090.1                                                        50   2e-06

>Glyma18g38610.1 
          Length = 443

 Score =  273 bits (698), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 140/239 (58%), Positives = 154/239 (64%), Gaps = 4/239 (1%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           MAARGGS+DCVRMLLAWGA+RLQLDSSG+IPF+VALK K++              VWPSP
Sbjct: 203 MAARGGSLDCVRMLLAWGADRLQLDSSGKIPFSVALKHKHKACAALLDPSSAAPLVWPSP 262

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           LKFISELNQEAK               K +LK  D+P SPLH                +M
Sbjct: 263 LKFISELNQEAKALLEKALLEANREREKTILKETDMPPSPLHSESEDDNIASEAS---DM 319

Query: 121 DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLIV 180
           +LCCICFDQ CTIEV+PCGHQMCAHCTLALCC KKPDP+T    GPVCPFCRG ILQL+V
Sbjct: 320 ELCCICFDQACTIEVRPCGHQMCAHCTLALCCHKKPDPATAGLSGPVCPFCRGTILQLLV 379

Query: 181 PTIKNSSDTEVESNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKIDDAEKQ 239
             I   SDTEVES P KPR                  A+GSFGRI GRNSGKI D EKQ
Sbjct: 380 AKINKISDTEVESGPMKPRRSRKSNFSEGSSSFKSLSAMGSFGRIAGRNSGKITD-EKQ 437


>Glyma08g47310.1 
          Length = 438

 Score =  267 bits (683), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 138/239 (57%), Positives = 155/239 (64%), Gaps = 4/239 (1%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           MAARGGS+DCVRMLLAWGA+RLQLDSSG+IPF+VALK K++              VWPSP
Sbjct: 204 MAARGGSLDCVRMLLAWGADRLQLDSSGKIPFSVALKHKHKACAALLDPSSAAPLVWPSP 263

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           LKFISELNQEAK               K +LK  D+P SPL+                +M
Sbjct: 264 LKFISELNQEAKALLEKALQEANREREKTILKETDMPPSPLNSESEDDNIASEAS---DM 320

Query: 121 DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLIV 180
           +LCCICFDQ CTIEV+PCGHQMCAHCTLALCC KK DP+T    GPVCPFCRG+ILQL+V
Sbjct: 321 ELCCICFDQACTIEVRPCGHQMCAHCTLALCCHKKLDPATTGLSGPVCPFCRGSILQLLV 380

Query: 181 PTIKNSSDTEVESNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKIDDAEKQ 239
             I   SDTEVES+P KPR                  A+GSFGRI GRNSGKI D EKQ
Sbjct: 381 AKINKISDTEVESSPMKPRRSRKSNFSEGSSSFKSLSAMGSFGRIAGRNSGKITD-EKQ 438


>Glyma15g04410.1 
          Length = 444

 Score =  185 bits (470), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 130/240 (54%), Gaps = 11/240 (4%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AARGGS+DC+R LLAWGA+RLQ D+SGRIP+ VALK K+               VWPSP
Sbjct: 201 LAARGGSIDCIRELLAWGADRLQRDASGRIPYMVALKHKHGACASLLNPTSAEPLVWPSP 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPT-SPLHXXXXXXXXXXXXXXXXN 119
           LKFISELN EAK               K +LK +     SP H                 
Sbjct: 261 LKFISELNPEAKALLEQALMDANREREKNILKGSSYSLPSPSHSDGVADNMSEVSES--- 317

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLI 179
            +LCCICF+QVCTIEV+ CGHQMCA CTLALCC  KP+P+T C   PVCPFCR  I +L+
Sbjct: 318 -ELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPATACLTPPVCPFCRSTITRLV 376

Query: 180 VPTIKNSSDTEVESNP------TKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKI 233
           V   +   +T+ +S        +K                    ++ SFG++  R+SG+I
Sbjct: 377 VVKTECHDETDQDSADINCSKLSKSSRKLRHLNDSGSSSFKGLSSVSSFGKLGSRSSGRI 436


>Glyma13g41040.2 
          Length = 444

 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 130/240 (54%), Gaps = 11/240 (4%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AARGGS+DC+R LLAWGA+RLQ D+SGRIP+ VALK K+               VWPSP
Sbjct: 201 LAARGGSLDCIRELLAWGADRLQRDASGRIPYMVALKHKHGACASLLNPTSAEPLVWPSP 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPT-SPLHXXXXXXXXXXXXXXXXN 119
           LKFISELN EAK               K +LK +     SP H                 
Sbjct: 261 LKFISELNPEAKALLEQALMDANREREKNILKGSSYSLPSPSHSDGVADNTSEVSES--- 317

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLI 179
            +LCCICF+QVCTIEV+ CGHQMCA CTLALCC  KP+P+T C   PVCPFCR  I +L+
Sbjct: 318 -ELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPATACLTPPVCPFCRSTITRLV 376

Query: 180 VPTIKNSSDTEVE------SNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKI 233
           V   +   +T+ +      S  +K                    ++ SFG++  R+SG+I
Sbjct: 377 VVKTECHDETDQDSVDINCSKLSKSSRKLRNLNDIGSSSFKGLSSVSSFGKLGSRSSGRI 436


>Glyma13g41040.1 
          Length = 451

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 132/243 (54%), Gaps = 10/243 (4%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AARGGS+DC+R LLAWGA+RLQ D+SGRIP+ VALK K+               VWPSP
Sbjct: 201 LAARGGSLDCIRELLAWGADRLQRDASGRIPYMVALKHKHGACASLLNPTSAEPLVWPSP 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPT-SPLHXXXXXXXXXXXXXXXXN 119
           LKFISELN EAK               K +LK +     SP H                +
Sbjct: 261 LKFISELNPEAKALLEQALMDANREREKNILKGSSYSLPSPSHSDGVADNTSEVIPHPLH 320

Query: 120 M---DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAIL 176
           +   +LCCICF+QVCTIEV+ CGHQMCA CTLALCC  KP+P+T C   PVCPFCR  I 
Sbjct: 321 VSESELCCICFEQVCTIEVQNCGHQMCAQCTLALCCHNKPNPATACLTPPVCPFCRSTIT 380

Query: 177 QLIVPTIKNSSDTEVE------SNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNS 230
           +L+V   +   +T+ +      S  +K                    ++ SFG++  R+S
Sbjct: 381 RLVVVKTECHDETDQDSVDINCSKLSKSSRKLRNLNDIGSSSFKGLSSVSSFGKLGSRSS 440

Query: 231 GKI 233
           G+I
Sbjct: 441 GRI 443


>Glyma12g06850.1 
          Length = 447

 Score =  181 bits (459), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 131/242 (54%), Gaps = 16/242 (6%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AA+GGS+DC+R LLAWGA+RLQ D+SGRIP+ VALK ++               VWPS 
Sbjct: 201 LAAKGGSLDCIRELLAWGADRLQRDASGRIPYVVALKHRHGACATLLNLSSAESLVWPSS 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPT-SPLHXXXXXXXXXXXXXXXXN 119
           LK ISELN  AK               K +LK +D    SP H                 
Sbjct: 261 LKIISELNPNAKELLERALMDANREREKNILKGSDYSLPSPSHSDGVDDNISEVS----E 316

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLI 179
            +LCCICF+QVCTIEV+ CGHQMCA CTLALCC  KP+PST     PVCPFCR +I +L+
Sbjct: 317 TELCCICFEQVCTIEVQDCGHQMCAQCTLALCCHNKPNPSTSRVIPPVCPFCRSSIARLV 376

Query: 180 VPTIKNSSDTEVE--------SNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSG 231
           V  +KN S  ++         S P+K R                   + SFG++ GR+SG
Sbjct: 377 V--VKNESPDDINQDGVDITCSKPSKSRKLRNLNEDGSSSIKGLSN-VNSFGKMGGRSSG 433

Query: 232 KI 233
           KI
Sbjct: 434 KI 435


>Glyma11g14900.1 
          Length = 447

 Score =  174 bits (440), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 128/240 (53%), Gaps = 12/240 (5%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AA+GGS+DC+R LLAWGA+RLQ D+SGRIP+ VALK ++               VWPS 
Sbjct: 201 LAAKGGSLDCIRELLAWGADRLQRDASGRIPYVVALKHRHGACAALLNLSSAEPLVWPSS 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPT-SPLHXXXXXXXXXXXXXXXXN 119
           LK ISELN +AK               K +LK +D    SP H                 
Sbjct: 261 LKIISELNPDAKELLERALMDANREREKNILKGSDYSLPSPSHSDGVDDNISEVS----E 316

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLI 179
            +LCCICF+QVCTIEV+ CGHQMCA CTLALCC  KP+P T     PVCPFCR  I +L+
Sbjct: 317 TELCCICFEQVCTIEVQDCGHQMCAQCTLALCCHNKPNPCTSRVIPPVCPFCRSTIARLV 376

Query: 180 VPTIKNSSDTEVE------SNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKI 233
           V   ++  D + +      S  +K R                   + SFG++ GR+SGKI
Sbjct: 377 VVKKESPDDIDQDGVDITCSKHSKSRKSRNSNEGGSSSIKGLSN-VNSFGKMGGRSSGKI 435


>Glyma08g42740.1 
          Length = 326

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 89/183 (48%), Gaps = 8/183 (4%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AAR GS+DC+R+LLA GA+RLQ D  G  P+T+AL+  +               VWP+ 
Sbjct: 150 LAARSGSLDCIRILLARGADRLQFDYHGNTPYTIALEHGHEECAALLGSTSGSSLVWPNH 209

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           L+FI EL+++ K               K           P                    
Sbjct: 210 LRFIRELDKKTKALLEKALVELNKERQKA-------KNKPRSSRNLERNNNNIASMAGKK 262

Query: 121 DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKP-DPSTGCTPGPVCPFCRGAILQLI 179
           +LC IC+D+VCT  V+PCGH+MCAHC + LC  K   D        PVCPFCRG I++L+
Sbjct: 263 ELCSICYDRVCTFVVRPCGHEMCAHCIMRLCQKKSDIDAPRSSNSKPVCPFCRGDIVRLL 322

Query: 180 VPT 182
             T
Sbjct: 323 AKT 325


>Glyma09g26560.1 
          Length = 504

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAILQL 178
           +D C +C ++ C++  + CGH++C  C L LC        TG  PG + CP CR  I+  
Sbjct: 308 VDACAVCLERQCSVAAEGCGHELCVRCALYLCSTSNVSSETGGPPGSIPCPLCRHGIVSF 367

Query: 179 I 179
           +
Sbjct: 368 V 368


>Glyma16g32090.1 
          Length = 504

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAILQL 178
           +D+C +C ++ C++  + CGH++C  C L LC        T   PG + CP CR  I+  
Sbjct: 308 VDVCAVCLERQCSVAAEGCGHELCVRCALYLCSTSNVSSETCGPPGSIPCPLCRHGIISF 367

Query: 179 I 179
           +
Sbjct: 368 V 368