Miyakogusa Predicted Gene

Lj0g3v0206119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206119.1 Non Chatacterized Hit- tr|I1MDG0|I1MDG0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,45.87,0.00000000002,seg,NULL,CUFF.13225.1
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g47320.1                                                       190   9e-49
Glyma18g38620.1                                                       187   7e-48
Glyma18g28150.1                                                        67   1e-11

>Glyma08g47320.1 
          Length = 174

 Score =  190 bits (482), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/170 (60%), Positives = 115/170 (67%), Gaps = 4/170 (2%)

Query: 4   QQEEGWPLGLRLSNARIGLLRNGEFSGSISFSTLLTDSPTHYSIDSSSDLDTQSTGSFFR 63
           QQEEGWPLGLR  N+RIGL+RNG  SGS SFST+LT S T  S DSSSDLDT+STGS F 
Sbjct: 3   QQEEGWPLGLRFLNSRIGLMRNG--SGSASFSTVLTTSHTP-STDSSSDLDTESTGSLFH 59

Query: 64  EKXXXXXXXXXXXXXXXXXXXXXXXXEVEPSKDNKKNHKLMKPWLFSLCSKLTTDAVIEN 123
           +                          VEPSKDNK+ HKL KPWLFSLCS+L+TDAVI N
Sbjct: 60  DDSITLGSLIGISSFFELSRRSTRGRMVEPSKDNKRIHKL-KPWLFSLCSRLSTDAVIGN 118

Query: 124 DAPSLGQYLMAERRAASAYRRNQCASIYGPNDFSPFREWNSLFVGGQVAP 173
           DAPSLG YL AERR AS YRRNQ  + YGPN FSP ++  SL VG Q+ P
Sbjct: 119 DAPSLGHYLQAERRGASTYRRNQFPTTYGPNGFSPIQDSTSLLVGSQIDP 168


>Glyma18g38620.1 
          Length = 186

 Score =  187 bits (475), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/189 (56%), Positives = 125/189 (66%), Gaps = 5/189 (2%)

Query: 4   QQEEGWPLGLRLSNARIGLLRNGEFSGSISFSTLLTDSPTHYSIDSSSDLDTQSTGSFFR 63
           QQEEGWPLGLR  N+RI L+RNG  SGS SFST+LT S T  S DSSSDLDT++TGSFF 
Sbjct: 3   QQEEGWPLGLRFLNSRIELMRNG--SGSASFSTVLTASHT-PSTDSSSDLDTEATGSFFH 59

Query: 64  EKXXXXXXXXXXXXXXXXXXXXXXXXEVEPSKDNKKNHKLMKPWLFSLCSKLTTDAVIEN 123
           +                          +EPSKDNK+ HKL KPWLFSLCS+L+TDAVI N
Sbjct: 60  DNSITLGSLIGISSFLELSRRSTRGRMMEPSKDNKRIHKL-KPWLFSLCSRLSTDAVIGN 118

Query: 124 DAPSLGQYLMAERRAASAYRRNQCASIYGPNDFSPFREWNSLFVGGQVAPSSSAMAKDGE 183
           DAPSLG YL AERRAAS YRRNQC + YGPN FSP ++  SL V  Q+    SA +  GE
Sbjct: 119 DAPSLGHYLEAERRAASTYRRNQCPTTYGPNGFSPIQDSTSLLVRSQIDHWPSA-SLGGE 177

Query: 184 REPNQTSEQ 192
            + N+  E+
Sbjct: 178 HDLNREMEE 186


>Glyma18g28150.1 
          Length = 72

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 33/39 (84%)

Query: 107 WLFSLCSKLTTDAVIENDAPSLGQYLMAERRAASAYRRN 145
           WLFSLCSKLTTDAV  N APSLG YL+AERRA S +RRN
Sbjct: 31  WLFSLCSKLTTDAVSVNVAPSLGHYLVAERRAESTHRRN 69