Miyakogusa Predicted Gene

Lj0g3v0205999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205999.1 tr|B9GMR8|B9GMR8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_708815 PE=4 SV=1,32.32,5e-19,BRCT
domain,BRCT domain; BRCT,BRCT domain; no description,NULL; seg,NULL;
breast cancer carboxy-term,CUFF.13168.1
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36420.1                                                       202   2e-52
Glyma17g08260.1                                                       201   3e-52
Glyma02g36420.2                                                       181   5e-46
Glyma08g28920.1                                                       107   1e-23
Glyma18g51840.1                                                       105   3e-23

>Glyma02g36420.1 
          Length = 442

 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 95/159 (59%), Positives = 122/159 (76%), Gaps = 1/159 (0%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FGF+CKSLAE+K DE ET G LA++L VLKQVH  FFDK +ED+ D
Sbjct: 282 LMERYHFFGSSCRQFGFNCKSLAELKSDENETDGALAKILKVLKQVHCMFFDK-QEDFDD 340

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+++S +R EVLSGCVI+F R     +P L+++A QMGATC+ ++DPSVTHVV+T A
Sbjct: 341 RDVRQMLSLVRREVLSGCVIIFSRIVHGAIPSLRKMAEQMGATCLTEIDPSVTHVVATDA 400

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            TEK +WA KE KF+VHP WI  A  FWQK PE N+I K
Sbjct: 401 GTEKCRWAVKEKKFVVHPLWIEAANYFWQKQPEENFILK 439


>Glyma17g08260.1 
          Length = 401

 Score =  201 bits (512), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 95/159 (59%), Positives = 122/159 (76%), Gaps = 1/159 (0%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FGF+CKSLAE+K DE ET G LA++L VLKQVH  FFDK +ED+ D
Sbjct: 241 LMERYHFFGSSCRQFGFNCKSLAELKSDEDETDGALAKILKVLKQVHCMFFDK-QEDFDD 299

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           +DVR+V+SS+R EVLSGCVI+F R     +P L+++A QMGATC+ ++DPSVTHVV+T A
Sbjct: 300 QDVRQVLSSVRREVLSGCVIIFSRIVHGAIPSLRKMAEQMGATCLTEIDPSVTHVVATDA 359

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            TEK +WA KE KF+VHP WI  A  FWQK PE N+  K
Sbjct: 360 GTEKCRWAVKEKKFVVHPLWIEAANYFWQKQPEENFSLK 398


>Glyma02g36420.2 
          Length = 430

 Score =  181 bits (459), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 110/159 (69%), Gaps = 13/159 (8%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FGF+CKSLAE+K DE ET G LA++L VLKQVH  FFD L      
Sbjct: 282 LMERYHFFGSSCRQFGFNCKSLAELKSDENETDGALAKILKVLKQVHCMFFDML------ 335

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
                  S +R EVLSGCVI+F R     +P L+++A QMGATC+ ++DPSVTHVV+T A
Sbjct: 336 -------SLVRREVLSGCVIIFSRIVHGAIPSLRKMAEQMGATCLTEIDPSVTHVVATDA 388

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            TEK +WA KE KF+VHP WI  A  FWQK PE N+I K
Sbjct: 389 GTEKCRWAVKEKKFVVHPLWIEAANYFWQKQPEENFILK 427


>Glyma08g28920.1 
          Length = 1165

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 11/166 (6%)

Query: 1    MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFF--DKLEEDY 58
            +++RY YF    + FG    SL E+  DE+   G LA  L V++++H  FF    LEE  
Sbjct: 1003 VVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAVIEKIHQIFFASQSLEE-- 1060

Query: 59   VDRDVRKVVSSLRSEVLSGCVIVFFRTKPAP-----LPFLQEIAMQMGATCMEKLDPSVT 113
               DVR +++S + ++L+GC IVF R  P       L  L + A Q GA C  ++D  VT
Sbjct: 1061 --VDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTNQIDEQVT 1118

Query: 114  HVVSTKARTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            HVV+    T+K  WA    +F+VHP W+  +   +++  E ++  K
Sbjct: 1119 HVVANSPGTDKVNWALNNGRFVVHPGWVEASALLYRRANEQDFAIK 1164


>Glyma18g51840.1 
          Length = 1068

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)

Query: 1    MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
            +++RY YF    + FG    SL E+  DE+   G LA  L V++++H  FF     + VD
Sbjct: 906  VVERYTYFPCSRRQFGLPGPSLLEIDHDERPEAGTLASSLAVIEKIHQIFFASRSLEEVD 965

Query: 61   RDVRKVVSSLRSEVLSGCVIVFFRTKPAP-----LPFLQEIAMQMGATCMEKLDPSVTHV 115
              VR +++S + ++L+GC IVF R  P       L  L + A Q GA C  ++D  VTHV
Sbjct: 966  --VRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAFCTNQIDEQVTHV 1023

Query: 116  VSTKARTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            V+    T+K  WA    +F+VHP W+  +   +++  E ++  K
Sbjct: 1024 VANSPGTDKVNWALNNGRFVVHPGWVEASALLYRRANEQDFAIK 1067