Miyakogusa Predicted Gene

Lj0g3v0205939.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205939.1 tr|Q9C8Z3|Q9C8Z3_ARATH Agenet domain-containing
protein OS=Arabidopsis thaliana GN=F5E6.15 PE=4
SV=1,39.73,9e-19,Tudor-like domain present in plant
sequences,Tudor-like, plant; seg,NULL; Agenet,Agenet-like
domain,CUFF.13160.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22810.1                                                        63   1e-10

>Glyma20g22810.1 
          Length = 323

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 13/137 (9%)

Query: 4   IFNKGEGVEVIKQNENDEYSYFPATVLRPPSKNNNMVFVEYQ-----APTKSRNREYVNV 58
            F  G  VEV  +++    S+F  TV+R  +  +    VEY        T  + RE + +
Sbjct: 21  FFKPGTAVEVSSEDDGFRGSWFTGTVIRRLA--SERFLVEYDNLLADDKTTKKLREVLGL 78

Query: 59  ASVRPKLPYELNPWFKVGDSVDAFRPNVTAFSWCPATVSDILENSTYRVDFR--GHSAAV 116
             +RP  P E +  FK GD VDAF  +     W    ++  LEN  + V FR        
Sbjct: 79  RHLRPLPPTETDREFKFGDEVDAFHND----GWWEGHITQELENERFAVYFRVSKEQLVF 134

Query: 117 DHCSLRLHRDWVNGNWV 133
               LRLHR+W+N +WV
Sbjct: 135 SKEQLRLHREWLNHDWV 151



 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 12/139 (8%)

Query: 3   SIFNKGEGVEVIKQNENDE----YSYFPATVLRPPSKNNNMV-FVEYQAPTKSRNREYVN 57
           ++  KG GV  I +  +DE     ++F ATV+    K+  +V + +  A   S+ RE ++
Sbjct: 181 TVKGKGIGVGAIVEVSSDEDGFSGAWFAATVVEALGKDKFLVEYHDLLADDDSQLREEID 240

Query: 58  VASVRPK-LPYELNPWFKVGDSVDAFRPNVTAFSWCPATVSDILENSTYRVDFRGHSAAV 116
              +RP  L  +++  F + D VDAF  +     W    +S  L +S Y V FR  +  +
Sbjct: 241 ALHIRPHPLDTDVDGQFSILDEVDAFYND----GWWVGVISKALADSRYVVYFRSSNEEL 296

Query: 117 D--HCSLRLHRDWVNGNWV 133
           +  +  LRLH+DW+ G WV
Sbjct: 297 EFENSQLRLHQDWIGGKWV 315