Miyakogusa Predicted Gene

Lj0g3v0205889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205889.1 tr|I7MPD6|I7MPD6_COXBE 30S ribosomal protein S6
OS=Coxiella burnetii 'MSU Goat Q177' GN=rpsF PE=3
SV,48.48,8e-19,Ribosomal protein S6,Ribosomal protein S6;
Ribosomal_S6,Ribosomal protein S6, plastid/chloroplast; S,CUFF.13156.1
         (269 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g03770.1                                                       379   e-105
Glyma15g14710.1                                                       379   e-105
Glyma17g23110.1                                                        54   2e-07

>Glyma09g03770.1 
          Length = 318

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/252 (71%), Positives = 214/252 (84%), Gaps = 6/252 (2%)

Query: 1   MEA--LFQGSCLAPSYPLLELPKSTTMLTNCVKFNLSHNPCFIFAN----SSRPFSAQSK 54
           MEA  L +GS L PSYP+ +L K+T M  NCV+F+ ++N C IFAN    SS P S Q+K
Sbjct: 1   MEAKSLLKGSSLKPSYPIHKLSKTTMMTPNCVRFSFNYNSCLIFANGYPSSSLPLSLQNK 60

Query: 55  PRKPFSVIVNAQKKDKKEDHHSFVSKPDESAGFFPEAVLLKKKIVEEDGEFLPEFEDAEE 114
           PRK  SV+V+A++KDKKED HS V KPDE  GFFPEAVLLKK+ VEE+G+ LPEFEDA+E
Sbjct: 61  PRKSASVVVSARRKDKKEDTHSSVPKPDEVTGFFPEAVLLKKRTVEEEGKLLPEFEDADE 120

Query: 115 RKLFESLMLEMDSDLNVELLRHYEIVYLIHEKHEEEVAAVNEKIQDFLREKKGTVWRFSD 174
           R+LFE+LMLE+DSD++V++LRHYE++YLIHEKHEEEV AVNEKIQDFLREKKG VWR +D
Sbjct: 121 RELFEALMLELDSDMDVDILRHYEVMYLIHEKHEEEVVAVNEKIQDFLREKKGQVWRLND 180

Query: 175 WGMRTLAYKIKKANKAHYILMNIEMDAKYINEFKTLLDQDERVIRHLVVKRDEAITEDCP 234
           WGMR LAYKIKKAN AHY+L+N E+DAKYIN+FKTLLDQDERVIRHLV+KRDEAITEDCP
Sbjct: 181 WGMRRLAYKIKKANNAHYMLINFELDAKYINDFKTLLDQDERVIRHLVIKRDEAITEDCP 240

Query: 235 PPPEFHTLGASV 246
           PPP+FHTL  + 
Sbjct: 241 PPPDFHTLRGNA 252


>Glyma15g14710.1 
          Length = 323

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/254 (74%), Positives = 216/254 (85%), Gaps = 8/254 (3%)

Query: 1   MEA--LFQGSCLAPSYPLLELPKSTTMLTNCVKFNLSHN-PCFIFANS-----SRPFSAQ 52
           MEA  L QGS L PSYPL +L K+T M  NCV+F+ ++N PC +FAN      S P S Q
Sbjct: 1   MEAKSLLQGSSLKPSYPLPKLSKTTMMTANCVRFSFNYNNPCLLFANGYPSSSSLPLSLQ 60

Query: 53  SKPRKPFSVIVNAQKKDKKEDHHSFVSKPDESAGFFPEAVLLKKKIVEEDGEFLPEFEDA 112
           +KPRK  SVIV+A+KKDKKED HS V KPDE  GFFPEAVLLKK+ VEE+G+ LPEFEDA
Sbjct: 61  NKPRKSASVIVSARKKDKKEDTHSSVPKPDEVTGFFPEAVLLKKRTVEEEGKLLPEFEDA 120

Query: 113 EERKLFESLMLEMDSDLNVELLRHYEIVYLIHEKHEEEVAAVNEKIQDFLREKKGTVWRF 172
           EER+LFE+LMLE+DSD++VE+LRHYE++YLIHEKHEEEVAAVNEKIQDFLREKKG VWR 
Sbjct: 121 EERQLFEALMLELDSDMDVEILRHYEVMYLIHEKHEEEVAAVNEKIQDFLREKKGQVWRL 180

Query: 173 SDWGMRTLAYKIKKANKAHYILMNIEMDAKYINEFKTLLDQDERVIRHLVVKRDEAITED 232
           +DWGMR LAYKIKKAN AHY+L+N E+DAKYIN+FKTLLDQDERVIRHLV+KRDEAITED
Sbjct: 181 NDWGMRRLAYKIKKANNAHYMLINFELDAKYINDFKTLLDQDERVIRHLVIKRDEAITED 240

Query: 233 CPPPPEFHTLGASV 246
           CPPPPEFHTL A+ 
Sbjct: 241 CPPPPEFHTLRANA 254


>Glyma17g23110.1 
          Length = 190

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 27/28 (96%)

Query: 134 LRHYEIVYLIHEKHEEEVAAVNEKIQDF 161
           +RHYE++YLIHEKHEEEVAAVNEKIQ F
Sbjct: 58  VRHYEVMYLIHEKHEEEVAAVNEKIQVF 85