Miyakogusa Predicted Gene

Lj0g3v0205819.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205819.1 tr|B9ILT3|B9ILT3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_669375 PE=4
SV=1,34.65,0.00000000000006,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; GOLGIN-84,NULL,CUFF.13153.1
         (452 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g08430.1                                                       597   e-171
Glyma01g01230.1                                                       514   e-146
Glyma17g18910.1                                                       187   1e-47
Glyma07g26770.1                                                       167   2e-41
Glyma02g18360.1                                                       106   6e-23

>Glyma16g08430.1 
          Length = 702

 Score =  597 bits (1539), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 322/445 (72%), Positives = 366/445 (82%), Gaps = 7/445 (1%)

Query: 1   MASWLKAAEDLFEVVDRRAKLVATDL-EDQSDSKSPAXXXXXXXXXXKGTKRKPKTKNGQ 59
           M SWLKAAE LFEVVDRRAK VA+DL E+Q DSKSPA          K TK KPK +   
Sbjct: 1   MDSWLKAAEGLFEVVDRRAKAVASDLSEEQGDSKSPASNGQGSQG--KRTKSKPKAQKAL 58

Query: 60  SNSPSITTDATKEDSGFPAALVDVTTPSDKVDLVAENDGDASVSTDQPKKEQQTTDATSP 119
           S+SP+I +D T E SG P+A VD+ T  DKVD   E D  AS ST+QPK E Q +DATSP
Sbjct: 59  SDSPTIISDTTHEKSGSPSAPVDIATSIDKVD--PEIDVSASTSTNQPK-EPQPSDATSP 115

Query: 120 ILGTSLSEMLTDDVGKHXXXXXXXXXXXXAGEVATVSANGEPTRENASDSHEVDPPPAPK 179
           +LG+SLS++L DDVGKH               VAT++ NG+P +E+ASD  E+DPPPAPK
Sbjct: 116 LLGSSLSKILGDDVGKHDTDDAEALVNDADIGVATIAGNGDPVQESASDICEMDPPPAPK 175

Query: 180 GIKVPEDEPTTSSGQIIKSGDSDANQNMDQEKSESVTSDLAPNSETAHKDSVIKVEPIEN 239
           GI+   DEPT S+GQIIKS D DA++N+D EKS+SV SD APN++   KDS +KVE + +
Sbjct: 176 GIEGSSDEPT-STGQIIKSRDLDASKNVDIEKSDSVASDTAPNNDPILKDSDVKVESVVD 234

Query: 240 QKSHKDHKTDISPKKVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGLSSRLQEYKSENA 299
           +KS +DHK DISP+KVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGLSSRLQEYKSENA
Sbjct: 235 EKSQEDHKADISPEKVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGLSSRLQEYKSENA 294

Query: 300 QLEELLTAERELSKSYEASIKQLQKNLSESKREVTRVESNMADALSAKNAEIEALLSSME 359
           QLEELLT+ERELSKSYEASIKQLQK+LSESKREVTRVESNM +AL+AKNAEIEALLSSM+
Sbjct: 295 QLEELLTSERELSKSYEASIKQLQKDLSESKREVTRVESNMVEALAAKNAEIEALLSSMD 354

Query: 360 AVKKQAALSEGNLASMQANMESMMRNRELTETRMMQALREELASTERRAEEERVAHNATK 419
           AVK+QAALSEGNLAS+QA+MESMMRNREL+ETRMMQALREELAS ERRAEEERVAHNATK
Sbjct: 355 AVKRQAALSEGNLASLQASMESMMRNRELSETRMMQALREELASAERRAEEERVAHNATK 414

Query: 420 MAAMERQVELEHRAVESSTALARIQ 444
           MAAMER+VELEHRAVESSTALARIQ
Sbjct: 415 MAAMEREVELEHRAVESSTALARIQ 439


>Glyma01g01230.1 
          Length = 680

 Score =  514 bits (1325), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 296/451 (65%), Positives = 338/451 (74%), Gaps = 41/451 (9%)

Query: 1   MASWLKAAEDLFEVVDRRAKLVATDL-EDQSDSKSPAXXXXXXXXX------XKGTKRKP 53
           M SWLKAAE LFEVVDRRAK VA+DL E+Q D KSPA                 G   + 
Sbjct: 1   MDSWLKAAEGLFEVVDRRAKAVASDLSEEQGDLKSPACFEEIIAYFSLPIFHQMGKDLRA 60

Query: 54  KTKNGQSNSPSITTDATKEDSGFPAALVDVTTPSDKVDLVAENDGDASVSTDQPKKEQQT 113
           + +N       +  D       +P                          T Q + E + 
Sbjct: 61  RRQNQNQRFCRLKRD-------YP--------------------------THQLQLEPRP 87

Query: 114 TDATSPILGTSLSEMLTDDVGKHXXXXXXXXXXXXAGEVATVSANGEPTRENASDSHEVD 173
           +DATSP+LG+SLS+ML DDVGKH               VAT++ANG+  +E+ASD  E+D
Sbjct: 88  SDATSPLLGSSLSKMLGDDVGKHDPDDVETLVNDADIGVATIAANGDTVQESASDVCEMD 147

Query: 174 PPPAPKGIKVPEDEPTTSSGQIIKSGDSDANQNMDQEKSESVTSDLAPNSETAHKDSVIK 233
           PPPAPK I+ P DEPT S+GQIIKS D DA++N+D EKSESV SD APN++T  KDS +K
Sbjct: 148 PPPAPKEIEGPSDEPT-STGQIIKSRDLDASKNVDIEKSESVASDTAPNNDTILKDSDVK 206

Query: 234 VEPIENQKSHKDHKTDISPKKVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGLSSRLQE 293
           +E + ++KS +DHKTDISPKKVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGLSSRLQE
Sbjct: 207 LESVVDEKSQEDHKTDISPKKVQDQLDEAQGLLKTTKSTGQSKEARLARVCAGLSSRLQE 266

Query: 294 YKSENAQLEELLTAERELSKSYEASIKQLQKNLSESKREVTRVESNMADALSAKNAEIEA 353
           YKSENAQLEELLT+ERELSKSYEASIKQLQK+LSESKREVTRVESNM +AL+AKNAEIEA
Sbjct: 267 YKSENAQLEELLTSERELSKSYEASIKQLQKDLSESKREVTRVESNMVEALAAKNAEIEA 326

Query: 354 LLSSMEAVKKQAALSEGNLASMQANMESMMRNRELTETRMMQALREELASTERRAEEERV 413
           LLSSM+AVK+QAALSEGNLAS+QA+MESMMRNREL+ETRMMQALREELAS ERRAEEER 
Sbjct: 327 LLSSMDAVKRQAALSEGNLASLQASMESMMRNRELSETRMMQALREELASAERRAEEERA 386

Query: 414 AHNATKMAAMERQVELEHRAVESSTALARIQ 444
           AHNATKMAAMER+VELEHRAVESSTALARIQ
Sbjct: 387 AHNATKMAAMEREVELEHRAVESSTALARIQ 417


>Glyma17g18910.1 
          Length = 228

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/208 (55%), Positives = 132/208 (63%), Gaps = 53/208 (25%)

Query: 266 LKTTKSTGQSKEARLARVCAGLSSRLQEYKSENAQLEELLTAERELSKSYEASIKQLQKN 325
           LKTTK  GQSKE RLAR                  LEELLT+ERELSKSYEASIK L K+
Sbjct: 1   LKTTKCIGQSKEVRLAR------------------LEELLTSERELSKSYEASIKWLLKD 42

Query: 326 LSESKREVTRVESNMADALSAKNAEIEALLSSMEAVKKQAAL---------SEGNLA--- 373
           L ESKREVTRVESNM          + AL++SM+ +K+QAA            GN+    
Sbjct: 43  LYESKREVTRVESNM----------VGALVNSMDVIKRQAAFKISSYCRLVGLGNIVIYL 92

Query: 374 ------------SMQANMESMMRNRELTETRMMQA-LREELASTERRAEEERVAHNATKM 420
                        + A+MESMMRNREL+ET MMQ  LREELAS +RRAEEER  HNATKM
Sbjct: 93  LHFPSLISSISVGLIASMESMMRNRELSETMMMQVTLREELASAKRRAEEERAGHNATKM 152

Query: 421 AAMERQVELEHRAVESSTALARIQVMSA 448
           AAMER+VELEHRA+ESS ALA IQ+  A
Sbjct: 153 AAMEREVELEHRAIESSIALAWIQLTVA 180


>Glyma07g26770.1 
          Length = 251

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/162 (60%), Positives = 119/162 (73%), Gaps = 17/162 (10%)

Query: 301 LEELLTAERELSKSYEASIKQLQKNLSESKREVTRVESNMADALSAKNAEIEALLSSMEA 360
           L+ +L  +RELSKSY+ASIKQLQK+L ESKREVTRVESNM +AL AKN EI+AL+SSM+A
Sbjct: 1   LKLILNLQRELSKSYKASIKQLQKDLYESKREVTRVESNMVEALVAKNDEIKALVSSMDA 60

Query: 361 VKKQAAL----------------SEGNLASMQANMESMMRNRELTETRMMQALREELAST 404
           VK QAA+                +   L S      SM+ +  LT   +++ALREE+A  
Sbjct: 61  VKSQAAIPYLRHKILCSFSPSPSTHLFLPSSSHPWLSMVVSFFLTYL-LVEALREEVAFV 119

Query: 405 ERRAEEERVAHNATKMAAMERQVELEHRAVESSTALARIQVM 446
           ERRAEEERVAHNATKM +MER+VELEHRAVESSTALARIQ++
Sbjct: 120 ERRAEEERVAHNATKMDSMEREVELEHRAVESSTALARIQLI 161


>Glyma02g18360.1 
          Length = 123

 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 63/68 (92%)

Query: 309 RELSKSYEASIKQLQKNLSESKREVTRVESNMADALSAKNAEIEALLSSMEAVKKQAALS 368
           +ELSKSYEASI QLQK+L ESKRE+TRVESNM +AL+AKNAEIEAL+SSM+ VK QAA+S
Sbjct: 56  QELSKSYEASITQLQKDLYESKREMTRVESNMVEALAAKNAEIEALVSSMDVVKSQAAMS 115

Query: 369 EGNLASMQ 376
           +GNLAS+Q
Sbjct: 116 QGNLASLQ 123