Miyakogusa Predicted Gene

Lj0g3v0205169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205169.1 Non Chatacterized Hit- tr|F6HIM4|F6HIM4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.58,1e-16,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; DUF573,Protein of unknown functio,CUFF.13105.1
         (306 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g32440.1                                                       140   1e-33
Glyma15g06890.1                                                       122   6e-28
Glyma05g12310.1                                                       103   2e-22
Glyma19g43180.1                                                        70   2e-12
Glyma03g40520.1                                                        70   3e-12
Glyma10g30160.1                                                        70   3e-12
Glyma20g37240.1                                                        69   8e-12
Glyma07g19780.1                                                        62   6e-10
Glyma15g41190.1                                                        62   1e-09
Glyma15g19480.1                                                        58   1e-08
Glyma05g14460.1                                                        56   4e-08
Glyma01g35890.1                                                        54   2e-07
Glyma20g37220.1                                                        50   3e-06

>Glyma13g32440.1 
          Length = 393

 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/174 (49%), Positives = 105/174 (60%), Gaps = 10/174 (5%)

Query: 105 PTPNP-KVKPLATKPMDQTQTHXXXXXXXX--XXXXXXXXXXXXXXXXXGDSKRXXXXXX 161
           P P P KVKPLA+KPMDQ Q                              DSKR      
Sbjct: 110 PDPTPVKVKPLASKPMDQAQKPKAQPSPAPPPKLTLKRPAENNNNNARVADSKRAKKKAT 169

Query: 162 XXXXXXXXGS----DEEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDP 217
                    +    D+EMEEDGKKSG++SKK F RLWS+EDE+AI+KG+ +F SKTG DP
Sbjct: 170 ESSSAANSAAAAASDDEMEEDGKKSGDNSKK-FQRLWSEEDELAIVKGVVEFTSKTGLDP 228

Query: 218 LKYPD--AFYDFVIRSLQADATRTQVKDKVRRLKKKFQTLAGKGKNGETPKFPK 269
           LK+P+  AF+DFV +SL  + +  Q+K+KVRRLKKKF+T AGKGKNGE PKF K
Sbjct: 229 LKFPNTNAFHDFVKKSLHVEVSCNQLKEKVRRLKKKFETQAGKGKNGEAPKFSK 282


>Glyma15g06890.1 
          Length = 370

 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 104/171 (60%), Gaps = 8/171 (4%)

Query: 105 PTPNP-KVKPLATKPMDQTQTHXXXXXXXXXXXXXXX---XXXXXXXXXXGDSKRXXXXX 160
           P P P KVKPLA+KPMDQ Q                               D KR     
Sbjct: 65  PHPTPVKVKPLASKPMDQAQKPKAQPSPAPPPPKSASKRPAENNNNNARVADPKRAKKKA 124

Query: 161 XXXXXXXXXGSDEEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKY 220
                     SD+EMEEDGKKSG++SKK F RLWS+EDE+AILKG+ +F SKTG DPLK+
Sbjct: 125 TESSSAAAI-SDDEMEEDGKKSGDNSKK-FQRLWSEEDELAILKGVVEFTSKTGLDPLKF 182

Query: 221 P--DAFYDFVIRSLQADATRTQVKDKVRRLKKKFQTLAGKGKNGETPKFPK 269
           P  +AF+DF+ +SL  + +  Q+K+K+RRLKKKF+T AGKGKNG+ PKF K
Sbjct: 183 PNANAFHDFMKKSLHVEFSSNQLKEKLRRLKKKFETQAGKGKNGDAPKFSK 233


>Glyma05g12310.1 
          Length = 259

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 67/97 (69%)

Query: 175 MEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQA 234
             E  +KSG    K   RL+S EDE+AILKG+A+FISKTG DP KY DAF +FV  SL+ 
Sbjct: 119 AHETEEKSGGGQAKLSQRLFSKEDELAILKGMAEFISKTGQDPYKYADAFQNFVKNSLRV 178

Query: 235 DATRTQVKDKVRRLKKKFQTLAGKGKNGETPKFPKVQ 271
           +A+  Q+K+K+RRLKKKF+T A + K  E P+F K  
Sbjct: 179 EASSNQIKEKIRRLKKKFETKAQRAKKWEDPEFSKFH 215


>Glyma19g43180.1 
          Length = 404

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 52/84 (61%)

Query: 184 NDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKD 243
           +DS++ F RLW+DEDEI +L+G  D+ S+ G+        FYD +   LQ D  + Q+ +
Sbjct: 103 DDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVE 162

Query: 244 KVRRLKKKFQTLAGKGKNGETPKF 267
           K+RRLKKK++ +  K  +G+   F
Sbjct: 163 KIRRLKKKYRNVLNKIGSGKEFSF 186


>Glyma03g40520.1 
          Length = 405

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 51/83 (61%)

Query: 185 DSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKDK 244
           DS++ F RLW+DEDEI +L+G  D+ S+ G+        FYD +   LQ D  + Q+ +K
Sbjct: 103 DSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEK 162

Query: 245 VRRLKKKFQTLAGKGKNGETPKF 267
           +RRLKKK++ +  K  +G+   F
Sbjct: 163 IRRLKKKYRNVLNKICSGKEFSF 185


>Glyma10g30160.1 
          Length = 372

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 173 EEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSL 232
           E +EE  KK+ +DS++ F RLW+DEDEI +L+G  D+ ++ G+        FYD +   L
Sbjct: 78  ELIEE--KKALDDSRRLFQRLWTDEDEIGLLQGFLDYTAQRGSSHHSDTALFYDQIKSKL 135

Query: 233 QADATRTQVKDKVRRLKKKFQTLAGKGKNGETPKF 267
           Q    + Q+ +K+RRLKKK++ +  K  +G+   F
Sbjct: 136 QLGFNKNQLVEKLRRLKKKYRNVVTKISSGKDVSF 170


>Glyma20g37240.1 
          Length = 354

 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 173 EEMEEDGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSL 232
           E +EE  KK+ +DS++ F RLW+DEDEI +L+G  ++ ++ G+        FYD +   L
Sbjct: 78  ELIEE--KKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKL 135

Query: 233 QADATRTQVKDKVRRLKKKFQTLAGKGKNGETPKF 267
           Q    + Q+ +K+RRLKKK++ +  K  +G+   F
Sbjct: 136 QLGFNKNQLVEKLRRLKKKYRNVLNKISSGKEVSF 170


>Glyma07g19780.1 
          Length = 203

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 47/77 (61%)

Query: 182 SGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQV 241
           S +DS++   RLW+DEDEI +L+G  D+  + G+        FYD +   LQ +  + Q+
Sbjct: 49  SLDDSQRLLQRLWTDEDEIKLLQGFLDYTLQRGSSHHNDTTLFYDQIKSKLQLNFNKNQL 108

Query: 242 KDKVRRLKKKFQTLAGK 258
            +K+RRLKKK++ +  K
Sbjct: 109 VEKIRRLKKKYRNVLNK 125


>Glyma15g41190.1 
          Length = 110

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 48/75 (64%)

Query: 184 NDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKD 243
           +DS++ F RLW+D+D   +L+G  D+ S+ G+        FY+ ++  LQ D ++ Q+ +
Sbjct: 7   DDSRRLFQRLWTDDDVTKLLQGFLDYTSQRGSSHDNNTALFYNQIMSKLQLDFSKNQLVE 66

Query: 244 KVRRLKKKFQTLAGK 258
           K+RRLKKK++ +  K
Sbjct: 67  KIRRLKKKYRNVLNK 81


>Glyma15g19480.1 
          Length = 88

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 47/76 (61%)

Query: 192 RLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKKK 251
           RLW+D++EI +L+G  D+IS+ G+        FYD +   LQ D  + Q+ +K+RRLKKK
Sbjct: 1   RLWTDDEEIELLQGFLDYISQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKK 60

Query: 252 FQTLAGKGKNGETPKF 267
           ++ +  K  +G+   F
Sbjct: 61  YRNILNKICSGKEFSF 76


>Glyma05g14460.1 
          Length = 144

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%)

Query: 192 RLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKKK 251
           +LW+DEDEI +L+G   + S+ G+        FYD +   LQ D  + Q+ +K+RRLKKK
Sbjct: 1   QLWTDEDEIELLQGFLYYTSQQGSSHHSDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKK 60

Query: 252 FQTLAGKGKNGETPKF 267
           ++ +     +G+   F
Sbjct: 61  YRNVLNNIFSGKEFSF 76


>Glyma01g35890.1 
          Length = 88

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 43/76 (56%)

Query: 192 RLWSDEDEIAILKGLADFISKTGNDPLKYPDAFYDFVIRSLQADATRTQVKDKVRRLKKK 251
           RLW+D DEI +L+G  D+ S+ G+        FYD +   LQ D  + Q+ +K+RRLKKK
Sbjct: 1   RLWTDNDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKK 60

Query: 252 FQTLAGKGKNGETPKF 267
              +  K  +G+   F
Sbjct: 61  CWNVLNKICSGKEFSF 76


>Glyma20g37220.1 
          Length = 327

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 178 DGKKSGNDSKKQFTRLWSDEDEIAILKGLADFISKTGNDPLKYPD---AFYDFVIRSLQA 234
           + K SG    +Q+ RLW+ EDE+ +LKG  D++ +   +         + YD V   L  
Sbjct: 79  NAKYSG--MVRQYQRLWTKEDEMELLKGYLDYVKRHRKETTTLQSVVASLYDHVRPKLNV 136

Query: 235 DATRTQVKDKVRRLKKKFQTLAGKGKNGETP 265
              + Q+ +K+RRLK+K +    K K+ E P
Sbjct: 137 SFNKNQLVEKLRRLKRKHKLALDKDKDKEVP 167