Miyakogusa Predicted Gene
- Lj0g3v0205039.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0205039.1 Non Chatacterized Hit- tr|I1JJ07|I1JJ07_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,55.33,0,SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA
HELICASE,NULL,CUFF.13084.1
(269 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g45220.1 316 2e-86
Glyma14g03530.1 310 1e-84
Glyma02g35240.1 91 1e-18
Glyma10g10180.1 89 6e-18
Glyma08g05480.1 86 4e-17
Glyma15g36850.1 83 3e-16
Glyma09g18490.1 82 5e-16
Glyma08g41700.1 79 7e-15
Glyma05g34180.1 76 4e-14
Glyma08g24630.1 75 1e-13
Glyma20g25800.1 74 2e-13
>Glyma02g45220.1
Length = 931
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/300 (55%), Positives = 209/300 (69%), Gaps = 32/300 (10%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
ML F+ILMNCLDPALTL CAS + DPFT P+L +EKKRA+AA+ ELASLYGGCSD ++
Sbjct: 528 MLFFAILMNCLDPALTLACASDYRDPFTLPMLPEEKKRASAAKSELASLYGGCSDQFAVL 587
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
A FECW N+ +MGLE RFCSQYFVS S M+MLS MR +L EL + G IH+DVS Y +N+
Sbjct: 588 AAFECWNNAKKMGLEARFCSQYFVSSSAMNMLSGMRRQLQAELIRIGFIHEDVSGYSVNT 647
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNFKLFSQKNFGCS 180
HDPGVL+AVLVAG+YP +G+ L N+ GKRV V+T + ++V L +HS NFKL +KN +
Sbjct: 648 HDPGVLHAVLVAGLYPRVGRFLTNKGGKRVIVETTSGDKVRLHNHSTNFKLSFKKNLDNT 707
Query: 181 LLAYDEIARDDWGMSISNCSVVGPLPLLLLCKEIAVTSIKDSKEGD-------------- 226
L+ YDEI R D GM+I NC+VVGPLPLLLL EIAV +++ EGD
Sbjct: 708 LIVYDEITRGDGGMNIRNCTVVGPLPLLLLSTEIAVAPAEENDEGDVDDAVGSEDEAGSE 767
Query: 227 ------------------KSSDNIVRVIVDRWLDFRSKALDISHINYLRNQLSAAILFKV 268
S DN+V+VI+DRWL FRS A+D++ + LR +LSAAIL+KV
Sbjct: 768 DGMEFDAESSGGREDKLMSSPDNMVKVIMDRWLYFRSTAIDVAQLYCLRERLSAAILYKV 827
>Glyma14g03530.1
Length = 843
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 209/300 (69%), Gaps = 32/300 (10%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
ML F+ILMNCLDPALTL CAS + DPFT P+L +EKKRA+AA++ELASLYGGCSD I+
Sbjct: 459 MLFFAILMNCLDPALTLACASDYRDPFTLPMLPEEKKRASAAKYELASLYGGCSDQFAIL 518
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
A FECW N+ +MGLE RFCSQYFVS STM+MLS MR +L EL + G IH+DVS Y +N+
Sbjct: 519 AAFECWNNAKKMGLEARFCSQYFVSSSTMNMLSGMRRQLQAELIRLGFIHEDVSGYSVNT 578
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNFKLFSQKNFGCS 180
HDPGVLNAVLVAG+YP +G+ L N+SGKRV V+T + ++V L +HS+NFKL +K +
Sbjct: 579 HDPGVLNAVLVAGLYPRVGRFLTNKSGKRVIVETTSGDKVRLHNHSINFKLSFKKKLDDT 638
Query: 181 LLAYDEIARDDWGMSISNCSVVGPLPLLLLCKEIAVTSI--------------------K 220
L+ YDEI R D GM++ NC+VVGPLPLLLL EIAV +
Sbjct: 639 LIVYDEITRGDGGMNLRNCTVVGPLPLLLLSTEIAVAPAEENDEGDEDDVGGSEDEAGSE 698
Query: 221 DSKEGDKSS------------DNIVRVIVDRWLDFRSKALDISHINYLRNQLSAAILFKV 268
D E D S DN+V+VI+DRWL F S A+D++ + LR +LSAAIL+KV
Sbjct: 699 DVMEFDAESSGGREDKLMSSPDNMVKVIMDRWLYFCSTAIDVAQLYCLRERLSAAILYKV 758
>Glyma02g35240.1
Length = 1022
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
ML+ + CL+PALT+ + + +PF P+ E+ AA F S CSDH+ ++
Sbjct: 746 MLLMGSIFQCLNPALTIAASLAYRNPFVLPINRKEEADAAKQFFAGDS----CSDHIALL 801
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLN- 119
FE W+ + R G E++FC F+S +T+ ++ +MR + L G + + N
Sbjct: 802 KAFEGWKEAKRSGNEKQFCWDNFLSPATLRLIDNMRMQFLNLLSDIGFVDKSRGANVYNQ 861
Query: 120 -SHDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNFKLF 172
SHD ++ A+L AG+YP + + GKR T+ +V + SVN ++
Sbjct: 862 YSHDLEMVCAILCAGLYPNVVQC--KRRGKRTAFYTKEVGKVDIHPASVNAGIY 913
>Glyma10g10180.1
Length = 1058
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
ML+ + CL+PALT+ A + +PF P+ E+ AA F S CSDHL ++
Sbjct: 786 MLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKQSFAGDS----CSDHLALL 841
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDD--VSSYCL 118
FE W+ + R G E++F F+S +T+ ++ MR + L G + ++Y
Sbjct: 842 KAFEGWKEAKRSGNEKQFGWDNFLSLATLRLIDDMRMQFLNLLSDIGFVDKSRGATAYNQ 901
Query: 119 NSHDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN---------F 169
SHD ++ A+L AG+YP + + GKR T+ +V + SVN +
Sbjct: 902 YSHDLEMVCAILCAGLYPNVVQC--KRRGKRTAFYTKEVGKVDIHPASVNAGVHLFPLPY 959
Query: 170 KLFSQKNFGCSLLAYDEIARDDWGM 194
++S+K S+ D D+ +
Sbjct: 960 MVYSEKVKTTSIYIRDSTNISDYAL 984
>Glyma08g05480.1
Length = 1177
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
MLI + CLDP +T+ DPF P D+K A +A+ +LA+ G SDHL +I
Sbjct: 777 MLILGAIFKCLDPIMTVVAGLSVRDPFVMP--SDKKDLAESAKAQLAAR--GYSDHLALI 832
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
+E W+++ +C + F+S T+ + S+R + L GL++++ +Y S
Sbjct: 833 RAYEGWRDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVNNNSETYNTWS 892
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 168
H+ +L AV+ AG++P G S K + +KT +V L S SVN
Sbjct: 893 HEEHLLRAVICAGLFP--GISSVVNKDKSIALKTMEDGQVLLYSSSVN 938
>Glyma15g36850.1
Length = 110
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 162 LTSHSVNFKLFSQKNFGCSLLAYDE--IARDDWGMSISNCSVVGPLPLLLLCKEIAVTSI 219
L SHSVN KL QK F CSL+ YDE I +D M I NC+VVG LPL LL KEIAV
Sbjct: 31 LNSHSVNSKLSPQKTFDCSLVVYDENEITINDCSMWIRNCTVVGLLPLFLLSKEIAVALA 90
Query: 220 KDSKEGDK--SSDNIVRVIV 237
KD EG K SSDN+VRVI+
Sbjct: 91 KDCTEGHKTMSSDNVVRVII 110
>Glyma09g18490.1
Length = 801
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
MLIF ++ NCLDP LT+ DPF P+ D+K A AA+ + + Y SDHL I+
Sbjct: 407 MLIFGVIFNCLDPILTIVAGLSVRDPFLTPL--DKKDLAEAAKSQFSQDY---SDHLAIV 461
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
+E W+++ + +C + F+S +M ++ ++R E + L GL+ + SS S
Sbjct: 462 RAYEGWKDAEKDLNGHEYCWKNFLSAQSMRVIDALRMEFLSLLKDIGLVDSNTSSCNAWS 521
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNFK 170
+D ++ A + G+YP + + ++ +KT +V L S+SVN +
Sbjct: 522 YDMYLIRAAVCYGLYPGICSVVHKDTS--FSLKTMEDGQVLLHSNSVNAR 569
>Glyma08g41700.1
Length = 316
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 156 TCNEVGLTSHSVNFKLFSQKNFGCSLLAYDE--IARDDWGMSISNCSVVGPLPLLLLCKE 213
T + L SHSVN KL QK F CSL+ YDE I +D M I NC+VVG LPL LL KE
Sbjct: 99 TKQKAWLNSHSVNSKLSPQKTFDCSLVVYDENEITINDCSMWIRNCTVVGLLPLFLLSKE 158
Query: 214 IAVTSIKDSKEGDK--SSDNIVRV 235
IAV KD EG + SSDN+VRV
Sbjct: 159 IAVALAKDCTEGHESISSDNLVRV 182
>Glyma05g34180.1
Length = 1180
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
MLI + CLDP +T+ DPF P D+K A +A+ + A+ SDHL +I
Sbjct: 780 MLILGAIFKCLDPIMTIVAGLSVRDPFVMP--SDKKDLAESAKAQFAAR--DYSDHLALI 835
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
++ W+++ +C + F+S T+ + S+R + L L++++ +Y S
Sbjct: 836 RAYDGWRDAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDICLVNNNSETYNTWS 895
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 168
H+ +L AV+ AG++P G S K + +KT +V L S SVN
Sbjct: 896 HEEHLLRAVICAGLFP--GISSVVNKDKSIALKTMEDGQVLLYSSSVN 941
>Glyma08g24630.1
Length = 1220
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
MLI + C DP LT+ DPF P D++ A A+ ++ SDH+ ++
Sbjct: 819 MLIMGAIFRCFDPVLTIVAGLSVRDPFLLP--QDKRDLAGTAKSRFSA--KDYSDHMALV 874
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
+E W+++ R G +C + F+S T+ + S+R + + L + GL+ + + S
Sbjct: 875 RAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLVDAEANVINKLS 934
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVNFK 170
H+ ++ AV+ +G++P + + E+ + KT +V L ++SVN +
Sbjct: 935 HNQSLVRAVICSGLFPGIASVVHRETS--MSFKTMDDGQVLLYANSVNAR 982
>Glyma20g25800.1
Length = 1101
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 1 MLIFSILMNCLDPALTLECASVFDDPFTHPVLHDEKKRAAAARFELASLYGGCSDHLPII 60
MLI + NCLDP LT+ DPF P+ D++ A A+ + Y SDHL ++
Sbjct: 703 MLILGAIFNCLDPILTVVAGLSVRDPFLTPL--DKRDLAEEAKSQFCGAY---SDHLALV 757
Query: 61 AVFECWQNSTRMGLEERFCSQYFVSQSTMHMLSSMRTELATELFQNGLIHDDVSSYCLNS 120
+E W+++ +C + F+S +M + ++R E + GL+ + +S S
Sbjct: 758 RAYEGWRDAEMDLGGYEYCWKNFLSSQSMKAIDALRREFICLVKDIGLVDSNTASCNEWS 817
Query: 121 HDPGVLNAVLVAGMYPVLGKSLPNESGKRVFVKTETCNEVGLTSHSVN 168
D ++ A++ G+YP + + NE K +KT +V L S+SVN
Sbjct: 818 SDVNLIRAIICYGLYPGICSVVHNE--KSFSLKTMEDGQVLLYSNSVN 863