Miyakogusa Predicted Gene
- Lj0g3v0204759.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0204759.1 Non Chatacterized Hit- tr|D8R9X3|D8R9X3_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,39.84,1e-18,APO,APO domain; APO_RNA-bind,APO domain;
EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1,NULL,CUFF.13074.1
(130 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g11010.1 223 6e-59
Glyma02g34110.1 193 4e-50
Glyma02g39600.1 151 2e-37
Glyma09g10560.1 142 1e-34
Glyma09g28230.1 142 1e-34
Glyma16g33060.1 139 7e-34
Glyma12g28480.1 115 2e-26
Glyma14g37660.1 108 1e-24
Glyma13g38330.1 94 3e-20
Glyma12g32140.1 87 5e-18
Glyma06g28560.1 61 4e-10
>Glyma10g11010.1
Length = 404
Score = 223 bits (567), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/130 (81%), Positives = 115/130 (88%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
MKAWEKM GASKLM+ YA QTCGYCPEVQVGPKGHR RNCQAFKHQMRDGQHAWQEA I
Sbjct: 275 MKAWEKMHGGASKLMEKYAVQTCGYCPEVQVGPKGHRGRNCQAFKHQMRDGQHAWQEARI 334
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVV 120
+DL PPVYV+HI D Q KPLV+ELK+YYGMLPAVVELFAQAGA V+K+YA MREDVV+
Sbjct: 335 DDLAPPVYVFHIRDDQPRKPLVNELKKYYGMLPAVVELFAQAGAPVDKSYACMMREDVVI 394
Query: 121 PEMDEEKLVV 130
P+MDEEK VV
Sbjct: 395 PQMDEEKWVV 404
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 6 KMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVP 65
++ + S+L++ A TC C EV VG H++R C + +H+W + + ++P
Sbjct: 107 ELISTVSRLVNYIAIYTCSLCGEVHVGHPPHQIRTCDV-RGSPSSKEHSWVKGGVEHVLP 165
Query: 66 PVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATV 106
V +H+ D + G+ + H +PA+VEL QAG +
Sbjct: 166 LVESFHLYD-RIGRAVSHNEMLEVDRIPAIVELCIQAGFDI 205
>Glyma02g34110.1
Length = 330
Score = 193 bits (491), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 103/130 (79%), Gaps = 14/130 (10%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
MKAWEKM GASKLM YA QTCGY PEVQVGPKGHRVRNCQAFKHQ+RDGQ
Sbjct: 215 MKAWEKMRGGASKLMGKYAVQTCGYYPEVQVGPKGHRVRNCQAFKHQIRDGQ-------- 266
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVV 120
+YVYHI D Q KPLV+ELKRYYGMLPAVVELFAQAGA V+KNYA MREDVV+
Sbjct: 267 ------LYVYHIRDDQHRKPLVNELKRYYGMLPAVVELFAQAGAPVDKNYASMMREDVVI 320
Query: 121 PEMDEEKLVV 130
PEMDEEKLVV
Sbjct: 321 PEMDEEKLVV 330
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 6 KMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVP 65
++ + S L++ A TC C EV VG H++R C + +H+W + + ++P
Sbjct: 61 ELISSVSTLVNYTAIYTCSLCGEVHVGHAPHKIRTCDV-RGSPSSKEHSWAKVGVEHVLP 119
Query: 66 PVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQA 102
V +H+ D + G+ + H +PA+VEL QA
Sbjct: 120 LVDSFHLYD-RIGRAVSHNEMLEVDRIPAIVELCVQA 155
>Glyma02g39600.1
Length = 413
Score = 151 bits (381), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 91/129 (70%), Gaps = 1/129 (0%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
+ +W +M +GA K+M+ Y TCGYCPEVQVGPKGH++R C+A KHQ R+G HAWQEAT+
Sbjct: 285 LDSWIEMTSGAKKIMEKYTVNTCGYCPEVQVGPKGHKLRMCKASKHQSRNGLHAWQEATL 344
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVV 120
+DLV P YV+H+ D +G L + LKRYYG PAVVEL +G V Y+ MR DVV
Sbjct: 345 DDLVIPNYVWHVED-LNGPALNNNLKRYYGKAPAVVELCVHSGTPVPDQYSSMMRLDVVS 403
Query: 121 PEMDEEKLV 129
P+ DE LV
Sbjct: 404 PDRDEVDLV 412
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 10 GASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVPPVYV 69
G S+L+ C C EV +G GH +R C + R+ H W + D+V
Sbjct: 116 GLSQLVRVIPVLRCRLCNEVHIGYIGHEIRTCTGPESFSRNAMHVWTRGGVQDVVFFPKC 175
Query: 70 YHIGDQQSGKPLV-HELKRYYGMLPAVVELFAQAGATVEK 108
+H+ D+ GKP V H+ + +PA+VEL QAG +EK
Sbjct: 176 FHLYDR-VGKPRVGHDERFSVPRIPAIVELCIQAGLDLEK 214
>Glyma09g10560.1
Length = 438
Score = 142 bits (358), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/131 (48%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
++AWE+M GA +LM Y + CGYCPE+ VG +GH+ +NC A KHQ R+GQH WQ A +
Sbjct: 310 LQAWERMRKGAKRLMRMYNVRVCGYCPEIHVGAQGHKAQNCGAHKHQQRNGQHGWQSAVL 369
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVV 120
NDL+PP +V+H+ D + PL EL+ +YG PAVVE+ QAGA + + Y +MR DV +
Sbjct: 370 NDLIPPRFVWHVPDVNA--PLERELRNFYGQAPAVVEMCIQAGAGLPEQYKSTMRLDVGI 427
Query: 121 PE-MDEEKLVV 130
P + E +VV
Sbjct: 428 PSTLKEADMVV 438
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 13 KLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVPPVYVYHI 72
KL+ CG+C E+ VGP GH ++C+ + +R G H W A + D++ P+ YH+
Sbjct: 153 KLLKVVPVHACGWCSEIHVGPVGHPFKSCKGTQANIRKGLHEWTNAHVEDILIPIEAYHL 212
Query: 73 GDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVV 119
D+ GK + HE + +PAVVEL QAG + + R+ ++
Sbjct: 213 FDRL-GKRITHEERFSIPRIPAVVELCIQAGVEIPEFPTKRRRKPII 258
>Glyma09g28230.1
Length = 438
Score = 142 bits (357), Expect = 1e-34, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
M A+E + G KLM Y + CGYC EV VGP GH + C AFKHQ RDG+H WQ+AT+
Sbjct: 310 MSAYETVKKGVKKLMRKYTVKACGYCTEVHVGPWGHNAKLCGAFKHQWRDGKHGWQDATV 369
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVV 120
+++ PP YV+H+ D + G PL L+RYYG PAVVE+ QAGA + ++Y MR D+++
Sbjct: 370 DEVFPPNYVWHVRDPR-GPPLASALRRYYGKAPAVVEVCMQAGAQIPEDYKPMMRLDIII 428
Query: 121 PEMDEEKLV 129
P+ +E +++
Sbjct: 429 PDTEEARMI 437
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 3 AWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATIND 62
AW+ + G ++L+ C C EV V GH +R+C + R HAW + ++ND
Sbjct: 140 AWKLLIKGLAQLLHVIPVHGCSECTEVHVAQTGHHIRDCSGTNGRQRRSSHAWVKGSVND 199
Query: 63 LVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATV 106
++ P+ YH+ D G+ + H+ + Y +PAVVEL QAG +
Sbjct: 200 ILVPIESYHLFD-PFGRRIKHDTRFEYDRIPAVVELCVQAGVDI 242
>Glyma16g33060.1
Length = 438
Score = 139 bits (350), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 87/129 (67%), Gaps = 1/129 (0%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
M A+E + G KLM Y + CGYC EV VGP GH + C AFKHQ RDG+H WQ+AT+
Sbjct: 310 MSAYETVKKGVKKLMRKYTVKACGYCTEVHVGPWGHNAKLCGAFKHQWRDGKHGWQDATV 369
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVV 120
+++ PP YV+H+ D + G PL L+RYYG PAVVE+ QAGA + + Y MR D+++
Sbjct: 370 DEVFPPNYVWHVRDPR-GPPLASALRRYYGKAPAVVEVCMQAGAQIPEEYKPMMRLDIII 428
Query: 121 PEMDEEKLV 129
P+ +E +++
Sbjct: 429 PDTEEARMI 437
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 3 AWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATIND 62
AW+ + G ++L+ C C EV V GH +R+C + R HAW + ++ND
Sbjct: 140 AWKLLIEGLAQLLHVIPAHGCSECSEVHVAQTGHHIRDCSGTNGRQRRSSHAWVKGSVND 199
Query: 63 LVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATV 106
++ P+ YH+ D G+ + H+ + Y +PAVVEL QAG +
Sbjct: 200 ILVPIESYHLFD-PFGRRIKHDTRFEYDRIPAVVELCIQAGVDI 242
>Glyma12g28480.1
Length = 368
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 3/129 (2%)
Query: 3 AWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATIND 62
+ E++ GA +LM Y + CGYCPE+ VG +G + +NC+A KHQ R+GQH WQ A ++D
Sbjct: 242 SMERVRKGAKRLMRMYNVRVCGYCPEIHVGAQGLKAKNCEAHKHQQRNGQHGWQSAVLDD 301
Query: 63 LVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMREDVVVPE 122
L+PP +V+H+ D + L EL+ YG VE+ QAGA + + Y +MR DV +P
Sbjct: 302 LIPPRFVWHVPDVNAL--LERELRNSYGQAHVEVEMCIQAGAALPEQYKSTMRLDVGIPS 359
Query: 123 -MDEEKLVV 130
+ E +VV
Sbjct: 360 TLKEADMVV 368
>Glyma14g37660.1
Length = 337
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 7/104 (6%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
+ +W +M +G K+M+ Y+ TCGYCPEVQVGPK H++R C+A HQ R+ EAT+
Sbjct: 236 LDSWIEMTSGTKKIMEKYSVNTCGYCPEVQVGPKEHKLRMCKASNHQSRN------EATL 289
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGA 104
NDLV P YV+H+ + Q+G L + LKRYYG PA+VEL A G+
Sbjct: 290 NDLVDPNYVWHV-EYQNGPALNNNLKRYYGKAPALVELCACWGS 332
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 12 SKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVPPVYVYH 71
S+L+ C C EV +G GH ++ C + +R+ H W T D++ +H
Sbjct: 55 SQLVRVIPVLRCRLCNEVHIGYVGHEIQTCTGPESFLRNAMHIW---TRGDVIFFPKCFH 111
Query: 72 IGDQQSGKPLVHELKRY-YGMLPAVVELFAQAGATVEK 108
+ D + GKP V +R+ +PA++EL QAG +EK
Sbjct: 112 LYD-RVGKPRVGHDERFGVPCIPAIIELCIQAGLDLEK 148
>Glyma13g38330.1
Length = 295
Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
+ AWE + +G KL+ Y + C YC EV VGP GH+ R C FK++ G H W +A +
Sbjct: 175 LTAWETLRSGVEKLLLVYPVKVCKYCSEVHVGPSGHKARLCGVFKYESWKGAHFWMKANV 234
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMR 115
++LVPP V+ Q L++E + +YG +PAV++L ++AGA V Y M+
Sbjct: 235 DNLVPPKIVWR-RRPQDPPVLLNEGRGFYGRVPAVLDLCSKAGAVVPAKYNCMMK 288
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 10 GASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVPPVYV 69
G S L++ C +CPE+ +G +GH ++ C +KH+ ++ H W + +ND++ PV
Sbjct: 42 GVSTLLNFLPLMACKFCPEIYIGEQGHLIQTCSGYKHRAKNRVHEWIKGGLNDILVPVET 101
Query: 70 YHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGA 104
+H+ D + H + + +PAVVEL QAGA
Sbjct: 102 FHL-DNMFQSVIRHNERFDFDRIPAVVELCWQAGA 135
>Glyma12g32140.1
Length = 260
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 1 MKAWEKMCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATI 60
+ AWE + +G KL+ Y + C YC EV GP GH+ R C FK++ H W +A +
Sbjct: 126 LTAWETLRSGVEKLLLVYPVKVCKYCSEVHAGPSGHKARFCGVFKYESWKSAHFWMKANV 185
Query: 61 NDLVPPVYVYHIGDQQSGKPLVHELKRYYGMLPAVVELFAQAGATVEKNYAHSMR 115
++LVPP V+ Q L++E + +YG +PAV++ ++AGA V Y M+
Sbjct: 186 DNLVPPKIVWRRRPQDP-PVLLNEGRGFYGGVPAVLDQCSKAGAVVPAKYNCMMK 239
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 32 GPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVPPVYVYHIGDQQSGKPLVHELKRYYGM 91
G GH ++ C +KH ++ H W + +ND++ PV +H+ D+ + H+ + +
Sbjct: 15 GVVGHLIQTCWGYKHCAKNWVHEWVKGGLNDILVPVESFHL-DKMFQSVIRHDERFDFDH 73
Query: 92 LPAVVELFAQA 102
+PAVVEL QA
Sbjct: 74 IPAVVELCWQA 84
>Glyma06g28560.1
Length = 307
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 7 MCTGASKLMDTYAFQTCGYCPEVQVGPKGHRVRNCQAFKHQMRDGQHAWQEATINDLVPP 66
+ KL+ CG+C E+ VGP GH C+ +R G H W A + D++ P
Sbjct: 121 LINNLKKLLKVVPVHACGWCNEIHVGPVGHPFELCKGTHANIRKGLHEWTNAHVEDILIP 180
Query: 67 VYVYHIGDQQSGKPLVHELKRYYGM 91
+ YH+ D+ GK + HE +R+ G+
Sbjct: 181 IEAYHLFDRL-GKWITHE-ERFSGV 203