Miyakogusa Predicted Gene

Lj0g3v0204409.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0204409.2 Non Chatacterized Hit- tr|C5XJ90|C5XJ90_SORBI
Putative uncharacterized protein Sb03g046900
OS=Sorghu,51.65,5e-19,REGULATOR OF CHROMOSOME CONDENSATION
(RCC1),NULL; REGULATOR OF CHROMOSOME CONDENSATION,NULL;
seg,NUL,CUFF.13042.2
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03830.1                                                       235   2e-62
Glyma02g44920.1                                                       231   2e-61
Glyma08g41390.1                                                       220   4e-58
Glyma18g14970.1                                                       217   3e-57
Glyma18g14970.2                                                       216   6e-57
Glyma08g41050.1                                                        72   3e-13
Glyma20g30530.1                                                        70   1e-12
Glyma10g37110.1                                                        70   1e-12
Glyma16g28640.1                                                        68   3e-12
Glyma18g15520.1                                                        64   4e-11
Glyma02g09250.1                                                        62   3e-10
Glyma11g28160.1                                                        60   9e-10
Glyma07g09770.1                                                        55   3e-08
Glyma08g27780.1                                                        54   5e-08

>Glyma14g03830.1 
          Length = 1107

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 123/156 (78%), Positives = 124/156 (79%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKS NPVFGSSKKFFSASVP
Sbjct: 768 MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGSSKKFFSASVP 827

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                             KIVVDDAKRTNDSLSQEVIKLR QVE
Sbjct: 828 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLASPKIVVDDAKRTNDSLSQEVIKLRSQVE 887

Query: 121 SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
           +LTRKAQLQEVELERT KQLKDAIAIAGEETAKCKA
Sbjct: 888 NLTRKAQLQEVELERTAKQLKDAIAIAGEETAKCKA 923


>Glyma02g44920.1 
          Length = 1109

 Score =  231 bits (589), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 121/156 (77%), Positives = 123/156 (78%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MESFKQVESRSSKKNKKLEFNSSRVSP+PNGGSQWGA NISKS NPVFGSSKKFFSASVP
Sbjct: 770 MESFKQVESRSSKKNKKLEFNSSRVSPIPNGGSQWGASNISKSFNPVFGSSKKFFSASVP 829

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                              IVVDDAKRTNDSLSQEVIKLR QVE
Sbjct: 830 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPNIVVDDAKRTNDSLSQEVIKLRSQVE 889

Query: 121 SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
           +LTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA
Sbjct: 890 NLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 925


>Glyma08g41390.1 
          Length = 1083

 Score =  220 bits (561), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 115/156 (73%), Positives = 121/156 (77%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MES KQV+SRSSKKNKKLEFNSSRVSP PNGGSQWGA+NISKS NPVFGSSKKFFSASVP
Sbjct: 748 MESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPVFGSSKKFFSASVP 807

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                             KIVVDDAKR ND+LSQEV+KLR QVE
Sbjct: 808 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKIVVDDAKRINDNLSQEVVKLRSQVE 867

Query: 121 SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
           +LTRKAQLQEVELERTTKQLK+AIAIA EETAKCKA
Sbjct: 868 NLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKA 903


>Glyma18g14970.1 
          Length = 2061

 Score =  217 bits (553), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 113/156 (72%), Positives = 120/156 (76%)

Query: 1    MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
            MES KQV+SRSSKKNKKLEFNSSRVSP PNGGSQWGA+NISKS NP FGSSKKFFSASVP
Sbjct: 1726 MESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVP 1785

Query: 61   GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
            GSRIV                             K+VVDDAKR ND+LSQEV+KLR QVE
Sbjct: 1786 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQVE 1845

Query: 121  SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
            +LTRKAQLQEVELERTTKQLK+AIAIA EETAKCKA
Sbjct: 1846 NLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKA 1881


>Glyma18g14970.2 
          Length = 1042

 Score =  216 bits (551), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 113/156 (72%), Positives = 120/156 (76%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MES KQV+SRSSKKNKKLEFNSSRVSP PNGGSQWGA+NISKS NP FGSSKKFFSASVP
Sbjct: 748 MESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVP 807

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                             K+VVDDAKR ND+LSQEV+KLR QVE
Sbjct: 808 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQVE 867

Query: 121 SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
           +LTRKAQLQEVELERTTKQLK+AIAIA EETAKCKA
Sbjct: 868 NLTRKAQLQEVELERTTKQLKEAIAIASEETAKCKA 903


>Glyma08g41050.1 
          Length = 988

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 70/156 (44%), Gaps = 12/156 (7%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           + SF  +    S ++K  +   S + P  NG         SKS N +   SKK  S S P
Sbjct: 723 LASFGSIIQTESSQSKLPDSQDSHLFPALNGKPLMRGFAPSKSSNSLSIDSKKHLSVSEP 782

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
            +RI                                + D  K  ND LSQEVI LR QVE
Sbjct: 783 SARISCQSTSSVSSKSSPRQSYED------------INDHLKHRNDILSQEVISLRTQVE 830

Query: 121 SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
            LT K++  E ELERT+KQLK+  A+A +E  KCK+
Sbjct: 831 DLTHKSKSLEAELERTSKQLKEVTAVAADEAGKCKS 866


>Glyma20g30530.1 
          Length = 1084

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 51/62 (82%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKC 154
           K + D  K+TN+ L+QEV+KLR QVE+L ++ +LQE+EL+R+TK+ ++A+A+A EE+AK 
Sbjct: 807 KSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRSTKKAQEAMAVAAEESAKS 866

Query: 155 KA 156
           KA
Sbjct: 867 KA 868


>Glyma10g37110.1 
          Length = 1105

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 51/62 (82%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKC 154
           K + D  K+TN+ L+QEV+KLR QVE+L ++ +LQE+EL+R+TK+ ++A+A+A EE+AK 
Sbjct: 807 KSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRSTKKTQEAMALAAEESAKS 866

Query: 155 KA 156
           KA
Sbjct: 867 KA 868


>Glyma16g28640.1 
          Length = 895

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 48/62 (77%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKC 154
           K + D  K+TN+ L+QEV KL  QVESL ++ +LQE+EL+R+ K  ++A+A+A EE+AKC
Sbjct: 595 KSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKNTQEAMALAAEESAKC 654

Query: 155 KA 156
           KA
Sbjct: 655 KA 656


>Glyma18g15520.1 
          Length = 1008

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 69/156 (44%), Gaps = 12/156 (7%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           + SF  +    S ++K  +   S + P  NG  Q      SKS N +   SKK  S S P
Sbjct: 719 LASFGSIIQTESSQSKLPDSQDSHLFPSLNGKLQMRDFAPSKSSNSLSMDSKKHLSVSEP 778

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
            +RI                              + + DD K  ND LS EVI LR  VE
Sbjct: 779 AARI------------SCQSMSPVSSKSSPRQSYEDINDDLKYRNDILSLEVISLRTLVE 826

Query: 121 SLTRKAQLQEVELERTTKQLKDAIAIAGEETAKCKA 156
            LT K++  E E ERT+ QLK+  A+A +E  KCK+
Sbjct: 827 ELTHKSKSLEAEHERTSTQLKEMTAVAADEAGKCKS 862


>Glyma02g09250.1 
          Length = 1125

 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 46/62 (74%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKC 154
           K + D  K+TN+ L+QEV KL  QVESL ++ +LQE+EL+R+ K+ ++A A+A EE+ K 
Sbjct: 785 KSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKKTQEATALAAEESGKS 844

Query: 155 KA 156
           KA
Sbjct: 845 KA 846


>Glyma11g28160.1 
          Length = 839

 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 47/62 (75%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQLKDAIAIAGEETAKC 154
           K + D  K+TN+ L+QEV KL  QV+S  +  +LQE+E++R+TK+ ++A+A+  EE+AKC
Sbjct: 767 KSISDSLKKTNELLNQEVQKLHAQVKSPRQTCELQELEIQRSTKKPQEAMALFAEESAKC 826

Query: 155 KA 156
           KA
Sbjct: 827 KA 828


>Glyma07g09770.1 
          Length = 146

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/36 (80%), Positives = 33/36 (91%), Gaps = 1/36 (2%)

Query: 122 LTRKAQLQEVELERTTKQLKDAIAI-AGEETAKCKA 156
           +T+KAQLQEVELERT+KQLK+AIAI   EETAKCKA
Sbjct: 1   MTQKAQLQEVELERTSKQLKEAIAIQQSEETAKCKA 36


>Glyma08g27780.1 
          Length = 84

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/36 (80%), Positives = 33/36 (91%), Gaps = 1/36 (2%)

Query: 122 LTRKAQLQEVELERTTKQLKDAIAI-AGEETAKCKA 156
           +T+KAQLQEVELERT+KQLK+AIAI   EETAKCKA
Sbjct: 1   MTQKAQLQEVELERTSKQLKEAIAIQQSEETAKCKA 36