Miyakogusa Predicted Gene

Lj0g3v0204409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0204409.1 tr|D7KTY5|D7KTY5_ARALL Zinc finger protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476853
,40.43,1e-18,REGULATOR OF CHROMOSOME CONDENSATION (RCC1),NULL;
REGULATOR OF CHROMOSOME CONDENSATION,NULL; seg,NUL,CUFF.13042.1
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03830.1                                                       204   2e-53
Glyma02g44920.1                                                       200   3e-52
Glyma08g41390.1                                                       195   1e-50
Glyma18g14970.1                                                       191   2e-49
Glyma18g14970.2                                                       191   2e-49
Glyma08g41050.1                                                        56   1e-08
Glyma10g37110.1                                                        53   1e-07
Glyma20g30530.1                                                        53   1e-07
Glyma02g09250.1                                                        47   5e-06
Glyma16g28640.1                                                        47   6e-06

>Glyma14g03830.1 
          Length = 1107

 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/141 (76%), Positives = 109/141 (77%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKS NPVFGSSKKFFSASVP
Sbjct: 768 MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGSSKKFFSASVP 827

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                             KIVVDDAKRTNDSLSQEVIKLR QVE
Sbjct: 828 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLASPKIVVDDAKRTNDSLSQEVIKLRSQVE 887

Query: 121 SLTRKAQLQEVELERTTKQLK 141
           +LTRKAQLQEVELERT KQLK
Sbjct: 888 NLTRKAQLQEVELERTAKQLK 908


>Glyma02g44920.1 
          Length = 1109

 Score =  200 bits (509), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/141 (75%), Positives = 108/141 (76%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MESFKQVESRSSKKNKKLEFNSSRVSP+PNGGSQWGA NISKS NPVFGSSKKFFSASVP
Sbjct: 770 MESFKQVESRSSKKNKKLEFNSSRVSPIPNGGSQWGASNISKSFNPVFGSSKKFFSASVP 829

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                              IVVDDAKRTNDSLSQEVIKLR QVE
Sbjct: 830 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPNIVVDDAKRTNDSLSQEVIKLRSQVE 889

Query: 121 SLTRKAQLQEVELERTTKQLK 141
           +LTRKAQLQEVELERTTKQLK
Sbjct: 890 NLTRKAQLQEVELERTTKQLK 910


>Glyma08g41390.1 
          Length = 1083

 Score =  195 bits (496), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 102/141 (72%), Positives = 107/141 (75%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MES KQV+SRSSKKNKKLEFNSSRVSP PNGGSQWGA+NISKS NPVFGSSKKFFSASVP
Sbjct: 748 MESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPVFGSSKKFFSASVP 807

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                             KIVVDDAKR ND+LSQEV+KLR QVE
Sbjct: 808 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKIVVDDAKRINDNLSQEVVKLRSQVE 867

Query: 121 SLTRKAQLQEVELERTTKQLK 141
           +LTRKAQLQEVELERTTKQLK
Sbjct: 868 NLTRKAQLQEVELERTTKQLK 888


>Glyma18g14970.1 
          Length = 2061

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 106/141 (75%)

Query: 1    MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
            MES KQV+SRSSKKNKKLEFNSSRVSP PNGGSQWGA+NISKS NP FGSSKKFFSASVP
Sbjct: 1726 MESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVP 1785

Query: 61   GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
            GSRIV                             K+VVDDAKR ND+LSQEV+KLR QVE
Sbjct: 1786 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQVE 1845

Query: 121  SLTRKAQLQEVELERTTKQLK 141
            +LTRKAQLQEVELERTTKQLK
Sbjct: 1846 NLTRKAQLQEVELERTTKQLK 1866


>Glyma18g14970.2 
          Length = 1042

 Score =  191 bits (485), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 106/141 (75%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           MES KQV+SRSSKKNKKLEFNSSRVSP PNGGSQWGA+NISKS NP FGSSKKFFSASVP
Sbjct: 748 MESLKQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVP 807

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
           GSRIV                             K+VVDDAKR ND+LSQEV+KLR QVE
Sbjct: 808 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQVE 867

Query: 121 SLTRKAQLQEVELERTTKQLK 141
           +LTRKAQLQEVELERTTKQLK
Sbjct: 868 NLTRKAQLQEVELERTTKQLK 888


>Glyma08g41050.1 
          Length = 988

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 60/141 (42%), Gaps = 12/141 (8%)

Query: 1   MESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSLNPVFGSSKKFFSASVP 60
           + SF  +    S ++K  +   S + P  NG         SKS N +   SKK  S S P
Sbjct: 723 LASFGSIIQTESSQSKLPDSQDSHLFPALNGKPLMRGFAPSKSSNSLSIDSKKHLSVSEP 782

Query: 61  GSRIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIVVDDAKRTNDSLSQEVIKLRQQVE 120
            +RI                                + D  K  ND LSQEVI LR QVE
Sbjct: 783 SARISCQSTSSVSSKSSPRQSYED------------INDHLKHRNDILSQEVISLRTQVE 830

Query: 121 SLTRKAQLQEVELERTTKQLK 141
            LT K++  E ELERT+KQLK
Sbjct: 831 DLTHKSKSLEAELERTSKQLK 851


>Glyma10g37110.1 
          Length = 1105

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 37/45 (82%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQ 139
           K + D  K+TN+ L+QEV+KLR QVE+L ++ +LQE+EL+R+TK+
Sbjct: 807 KSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRSTKK 851


>Glyma20g30530.1 
          Length = 1084

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 37/45 (82%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQ 139
           K + D  K+TN+ L+QEV+KLR QVE+L ++ +LQE+EL+R+TK+
Sbjct: 807 KSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRSTKK 851


>Glyma02g09250.1 
          Length = 1125

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 34/45 (75%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTKQ 139
           K + D  K+TN+ L+QEV KL  QVESL ++ +LQE+EL+R+ K+
Sbjct: 785 KSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKK 829


>Glyma16g28640.1 
          Length = 895

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 33/44 (75%)

Query: 95  KIVVDDAKRTNDSLSQEVIKLRQQVESLTRKAQLQEVELERTTK 138
           K + D  K+TN+ L+QEV KL  QVESL ++ +LQE+EL+R+ K
Sbjct: 595 KSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAK 638