Miyakogusa Predicted Gene

Lj0g3v0204399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0204399.1 Non Chatacterized Hit- tr|F6HA19|F6HA19_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,80.77,1e-16,
,CUFF.13043.1
         (52 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g03830.1                                                       102   1e-22
Glyma02g44920.1                                                       101   2e-22
Glyma18g14970.1                                                        90   5e-19
Glyma08g41390.1                                                        89   8e-19
Glyma18g14970.2                                                        89   9e-19

>Glyma14g03830.1 
          Length = 1107

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/52 (94%), Positives = 51/52 (98%)

Query: 1   MVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 52
           ++DKDDK DSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG
Sbjct: 747 LIDKDDKLDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 798


>Glyma02g44920.1 
          Length = 1109

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 51/52 (98%)

Query: 1   MVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 52
           ++DKDDK DSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSP+PNG
Sbjct: 749 LIDKDDKLDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPIPNG 800


>Glyma18g14970.1 
          Length = 2061

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 45/49 (91%)

Query: 4    KDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 52
            KDDK DSRS NQLARFSSMES KQV+SRSSKKNKKLEFNSSRVSP PNG
Sbjct: 1708 KDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNG 1756


>Glyma08g41390.1 
          Length = 1083

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 45/49 (91%)

Query: 4   KDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 52
           KDDK DSRS NQLARFSSMES KQV+SRSSKKNKKLEFNSSRVSP PNG
Sbjct: 730 KDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNG 778


>Glyma18g14970.2 
          Length = 1042

 Score = 89.4 bits (220), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 45/49 (91%)

Query: 4   KDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 52
           KDDK DSRS NQLARFSSMES KQV+SRSSKKNKKLEFNSSRVSP PNG
Sbjct: 730 KDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSPAPNG 778