Miyakogusa Predicted Gene

Lj0g3v0203889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203889.1 Non Chatacterized Hit- tr|A3BWF3|A3BWF3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,59.42,5e-18,AF0625-like,NULL; seg,NULL;
tRNA_deacylase,D-aminoacyl-tRNA deacylase,CUFF.13022.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g31740.1                                                       197   2e-51
Glyma05g31740.2                                                       184   3e-47

>Glyma05g31740.1 
          Length = 316

 Score =  197 bits (501), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 92/115 (80%), Positives = 102/115 (88%)

Query: 1   MAQLVWEXXXXXXXTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVLKDDVWVGHLLSGY 60
           MAQLVWE       +D+GNW REND KK+LLGIGGGHYAPRH+DVVLKD+VWVGHLLSGY
Sbjct: 180 MAQLVWEGLGLGGVSDVGNWSRENDNKKILLGIGGGHYAPRHVDVVLKDNVWVGHLLSGY 239

Query: 61  SLPMEDPNNAKGERNTAIGGTWKESIKAAYEASKSAFPGGEILAHLDHKSFKGWQ 115
           SLPMEDPN +KGE+N  IGGTW++SIKAAYEA+ SAFPGGEILAHLDHKSFKGWQ
Sbjct: 240 SLPMEDPNQSKGEKNVEIGGTWRQSIKAAYEATYSAFPGGEILAHLDHKSFKGWQ 294


>Glyma05g31740.2 
          Length = 288

 Score =  184 bits (466), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 86/109 (78%), Positives = 96/109 (88%)

Query: 1   MAQLVWEXXXXXXXTDIGNWGRENDKKKVLLGIGGGHYAPRHMDVVLKDDVWVGHLLSGY 60
           MAQLVWE       +D+GNW REND KK+LLGIGGGHYAPRH+DVVLKD+VWVGHLLSGY
Sbjct: 180 MAQLVWEGLGLGGVSDVGNWSRENDNKKILLGIGGGHYAPRHVDVVLKDNVWVGHLLSGY 239

Query: 61  SLPMEDPNNAKGERNTAIGGTWKESIKAAYEASKSAFPGGEILAHLDHK 109
           SLPMEDPN +KGE+N  IGGTW++SIKAAYEA+ SAFPGGEILAHLDHK
Sbjct: 240 SLPMEDPNQSKGEKNVEIGGTWRQSIKAAYEATYSAFPGGEILAHLDHK 288