Miyakogusa Predicted Gene

Lj0g3v0203509.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203509.1 Non Chatacterized Hit- tr|A2ZTJ0|A2ZTJ0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,66.67,4e-16,seg,NULL; TRNASYNTHTYR,Tyrosine-tRNA ligase;
SUBFAMILY NOT NAMED,NULL; TYROSYL-TRNA SYNTHETASE,Tyros,CUFF.12966.1
         (502 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g40060.1                                                       744   0.0  
Glyma14g38260.1                                                       258   9e-69
Glyma14g38250.1                                                       192   8e-49
Glyma19g32020.1                                                       100   3e-21
Glyma20g08740.1                                                        84   3e-16
Glyma15g19990.1                                                        83   6e-16
Glyma18g10970.1                                                        74   4e-13

>Glyma02g40060.1 
          Length = 482

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/498 (77%), Positives = 415/498 (83%), Gaps = 27/498 (5%)

Query: 7   SRTILSSHSTKLFILPFKPPSSHASFSIPF---CFTRTTCTLQPLXXXXXXXXXXHGRSV 63
           +RT+L +HSTK F  PFKP SS      PF   C T+TTC+              +  +V
Sbjct: 8   TRTLLFTHSTKRFFRPFKPSSS------PFPLQCTTKTTCST---LQQQQQPRRNNNYNV 58

Query: 64  IGILEQRGLLESITSDALRTASSNAIDAPLKVYCGFDPTAESLHLGNLLGIIVLSWFRRC 123
           IGILE+RGL+ESITSDALR+A      APLKVYCGFDPTAESLHLGNLLG+IVLSWFR C
Sbjct: 59  IGILEERGLVESITSDALRSACLTP--APLKVYCGFDPTAESLHLGNLLGLIVLSWFRCC 116

Query: 124 GHNVVALIGGATARVGDPSGKSLERPELDVETLERNTAGIENTIRTILGRAQNLNLEELS 183
           GH  VALIGGATA VGDPSGKSLERPELD ETLERN                NL     +
Sbjct: 117 GHRAVALIGGATALVGDPSGKSLERPELDAETLERNQLD------------SNLVGPNSN 164

Query: 184 VGDGNLCDSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLDSEQGMSYT 243
               +  +SSVV+LNNYDWWKEFSLLDFLKRVGK+ARVGSMMAKESVRKRL+SEQGMSYT
Sbjct: 165 SDSNSDSNSSVVILNNYDWWKEFSLLDFLKRVGKFARVGSMMAKESVRKRLESEQGMSYT 224

Query: 244 EFTYQLLQGYDFLHLFQNEGVTVQIGGSDQWGNITAGTELVRKILQVESAVYGFTFPLLL 303
           EFTYQLLQGYDFLHLFQNEGV+VQIGGSDQWGNITAGTEL+RKILQVE A YG TFPLLL
Sbjct: 225 EFTYQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTELIRKILQVEGA-YGLTFPLLL 283

Query: 304 KSDGTKFGKSEDGAIWLSPSLLSPYKFYQYFFSVPDADVVRFLKILTFLDIEEIVKLEEE 363
           KSDGTKFGKSEDGAIWLSP+ LSPYKFYQYFFSVPD DV+RFLKILTFLDIEEIV LE E
Sbjct: 284 KSDGTKFGKSEDGAIWLSPTFLSPYKFYQYFFSVPDDDVIRFLKILTFLDIEEIVALEGE 343

Query: 364 MVKPGYVPNTAQRRLAEEVTRFVHGEDGLKEALRATEALRPGSETKLDWKTIEGIAEDVP 423
           M KPGYVPNTAQRRLAEEVTRFVHGEDGL EAL+ATEALRPGSETKLDWKTIEGIAEDVP
Sbjct: 344 MGKPGYVPNTAQRRLAEEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVP 403

Query: 424 SCSLAYDEVLNQSLVDLSVSSGLFDSKSSARRLLKQGGLYLNNSRVNSENKKIEAADIVD 483
            CSLAYD VLN SLVDL VSSGLF+SKS+ARRLLKQGGLYLNN+RV++E K+IEAADIVD
Sbjct: 404 CCSLAYDAVLNLSLVDLLVSSGLFESKSAARRLLKQGGLYLNNNRVDNEGKRIEAADIVD 463

Query: 484 GKVLLLSAGKKNKVLVRI 501
           GKVLLLSAGKKNKVLVRI
Sbjct: 464 GKVLLLSAGKKNKVLVRI 481


>Glyma14g38260.1 
          Length = 139

 Score =  258 bits (660), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 128/139 (92%), Positives = 135/139 (97%)

Query: 364 MVKPGYVPNTAQRRLAEEVTRFVHGEDGLKEALRATEALRPGSETKLDWKTIEGIAEDVP 423
           M KPGYVPNTAQRRLAEEVTRFVHGEDGL EAL+ATEALRPGSETKLDWKTIEGIAEDVP
Sbjct: 1   MGKPGYVPNTAQRRLAEEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVP 60

Query: 424 SCSLAYDEVLNQSLVDLSVSSGLFDSKSSARRLLKQGGLYLNNSRVNSENKKIEAADIVD 483
           SCSLAYD VLN SLVDLSVSSGLF+SKS+ARRLLKQGGLYLNN+RV+SE+K+IEAADIVD
Sbjct: 61  SCSLAYDAVLNLSLVDLSVSSGLFESKSAARRLLKQGGLYLNNNRVDSESKRIEAADIVD 120

Query: 484 GKVLLLSAGKKNKVLVRIA 502
           GKVLLLSAGKKNKVLVRIA
Sbjct: 121 GKVLLLSAGKKNKVLVRIA 139


>Glyma14g38250.1 
          Length = 157

 Score =  192 bits (487), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 105/163 (64%), Positives = 120/163 (73%), Gaps = 13/163 (7%)

Query: 1   MATNFA-SRTILSSHSTKLFILPFKPPSSHASFSIPF---CFTRTTCTLQPLXXXXXXXX 56
           MA+ +A +R++L +H+TK F  PFKP SS      PF   C T+TTC+            
Sbjct: 1   MASIYAPTRSLLFTHTTKCFFRPFKPSSS------PFPLHCATKTTCSTLQQQQQQPRRN 54

Query: 57  XXHGRSVIGILEQRGLLESITSDALRTASSNAIDAPLKVYCGFDPTAESLHLGNLLGIIV 116
             +  +VIGILE+RGL+ESITSDALR+A       PLKVYCGFDPTAESLHLGNLLG+IV
Sbjct: 55  NSNN-NVIGILEERGLVESITSDALRSAC--LTPPPLKVYCGFDPTAESLHLGNLLGLIV 111

Query: 117 LSWFRRCGHNVVALIGGATARVGDPSGKSLERPELDVETLERN 159
           LSWFRRCGH  VALIGGATARVGDPSGKSLERPELD ETLERN
Sbjct: 112 LSWFRRCGHRAVALIGGATARVGDPSGKSLERPELDAETLERN 154


>Glyma19g32020.1 
          Length = 102

 Score =  100 bits (250), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 67/132 (50%), Positives = 74/132 (56%), Gaps = 33/132 (25%)

Query: 75  SITSDALRTASSNAIDAPLKVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALIGGA 134
           SITSDALR+        PLK                         F RCGH  + LI G 
Sbjct: 1   SITSDALRSVCLTP--PPLK-------------------------FCRCGHRALVLIYGT 33

Query: 135 TARVGDPSGKSLERPELDVETLERNTAGIENTIRTILGRAQNLNLEELSVG--DGNLCDS 192
           TA VGDPSGKS +RPELD+ETLERN  GI NTI  ILG AQN NL    VG    +  +S
Sbjct: 34  TACVGDPSGKSCKRPELDIETLERNQLGISNTIHQILGYAQNSNL----VGPISNSGSNS 89

Query: 193 SVVVLNNYDWWK 204
           SVV+LNNYDWWK
Sbjct: 90  SVVILNNYDWWK 101


>Glyma20g08740.1 
          Length = 69

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/61 (67%), Positives = 46/61 (75%), Gaps = 4/61 (6%)

Query: 92  PLKVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALIGGATARVGDPSGKSLERPEL 151
           PL VY  F+PT ESLHL NLLG+I+LSWF    H  +ALI GAT  VGDP GKSLERP+L
Sbjct: 13  PLIVYYSFNPTVESLHLRNLLGLIILSWF----HRAIALIRGATVCVGDPFGKSLERPKL 68

Query: 152 D 152
           D
Sbjct: 69  D 69


>Glyma15g19990.1 
          Length = 43

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/43 (83%), Positives = 37/43 (86%)

Query: 95  VYCGFDPTAESLHLGNLLGIIVLSWFRRCGHNVVALIGGATAR 137
           VYCGFDPT ESLHLGNLL +IVLSWFRRCGH  VALI GAT R
Sbjct: 1   VYCGFDPTEESLHLGNLLDLIVLSWFRRCGHRAVALICGATVR 43


>Glyma18g10970.1 
          Length = 67

 Score = 73.9 bits (180), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/58 (60%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 67  LEQRGLLESITSDALRTASSNAIDAPLKVYCGFDPTAESLHLGNLLGIIVLSWFRRCG 124
           +E+ GL+ESI  D L   S      PLK YCGFDPT ESLHLGNLLG+ VLSWF  C 
Sbjct: 6   IEEHGLVESIIGDTLH--SEFLKPPPLKAYCGFDPTTESLHLGNLLGLFVLSWFCHCA 61