Miyakogusa Predicted Gene

Lj0g3v0202199.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0202199.1 Non Chatacterized Hit- tr|G7ZVK0|G7ZVK0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,52.88,2e-19,seg,NULL; Frigida,Frigida-like,CUFF.12857.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g11690.1                                                       115   1e-26

>Glyma11g11690.1 
          Length = 369

 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 17/150 (11%)

Query: 4   SHIFLLEQLLRISPHIKPGVRGEAMKLALDLKDNMRTSSKXXXXXXXXXXXXXIYRLVPF 63
           SHI LLEQL+RISP +KP VR EA+K+A  LK N+R S++              Y LV +
Sbjct: 99  SHILLLEQLMRISPRVKPRVREEALKIAFALKANIRESAENSLTILGFLLLLSAYGLVSY 158

Query: 64  FDEEEVLKLLE----------------FAGKTSDFVQNLVKKKLYIEAVRFICSFKLADK 107
           F ++E+ K LE                F  K  DFV+NL+ K+ +IEAVRFIC++KLADK
Sbjct: 159 FRKDELFKQLESAAQHKQAVELFRTLGFVDKIFDFVRNLIMKQQHIEAVRFICAYKLADK 218

Query: 108 NQPVDLLRKYIQNTKLVSER-SCRNTSSLQ 136
            QPVDLLR+++   K V+ R +C   S  Q
Sbjct: 219 IQPVDLLRQHVAKVKSVTNRFACMKESVEQ 248