Miyakogusa Predicted Gene

Lj0g3v0202129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0202129.1 tr|F2CSJ8|F2CSJ8_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,56.79,5e-19,seg,NULL; Phosphofructokinase,Phosphofructokinase
domain; no description,NULL,BW621562.path1.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g20400.1                                                       202   6e-53
Glyma20g01010.1                                                       199   5e-52

>Glyma07g20400.1 
          Length = 617

 Score =  202 bits (514), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 92/109 (84%), Positives = 95/109 (87%)

Query: 1   MDSDYGIPRELSDLQKLRSLYQPELPPCLQGTTVRVEFGXXXXXXXXXXXXXISRAFPHT 60
           MDSDYGIPRELSDLQK+RSLYQPELPPCLQGTTVRVEFG             ISRAFP+T
Sbjct: 1   MDSDYGIPRELSDLQKIRSLYQPELPPCLQGTTVRVEFGDATTTADPTDALTISRAFPNT 60

Query: 61  YGHPLAHFLRATAKVPDAQIITEHPPMRVGIVFCGRQSPGGHNVIWGLH 109
           YGHPLAHFLRATAKVPDAQIITE PP+RVGIVFCGRQSPGGHNVIWGLH
Sbjct: 61  YGHPLAHFLRATAKVPDAQIITEFPPIRVGIVFCGRQSPGGHNVIWGLH 109


>Glyma20g01010.1 
          Length = 617

 Score =  199 bits (506), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 89/109 (81%), Positives = 94/109 (86%)

Query: 1   MDSDYGIPRELSDLQKLRSLYQPELPPCLQGTTVRVEFGXXXXXXXXXXXXXISRAFPHT 60
           MDSDYGIPRELSDLQK+RSLYQPELPPCLQGTTVRVEFG             + RAFP+T
Sbjct: 1   MDSDYGIPRELSDLQKIRSLYQPELPPCLQGTTVRVEFGDATTTADPTDALTVCRAFPNT 60

Query: 61  YGHPLAHFLRATAKVPDAQIITEHPPMRVGIVFCGRQSPGGHNVIWGLH 109
           YGHPLAHFLRATAKVPDAQIITE PP+RVGIVFCGRQSPGGHNVIWG+H
Sbjct: 61  YGHPLAHFLRATAKVPDAQIITEFPPIRVGIVFCGRQSPGGHNVIWGIH 109