Miyakogusa Predicted Gene

Lj0g3v0201579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201579.1 Non Chatacterized Hit- tr|C5YB39|C5YB39_SORBI
Putative uncharacterized protein Sb06g034000
OS=Sorghu,35.37,4e-18,seg,NULL,CUFF.12806.1
         (256 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g07810.1                                                       237   8e-63
Glyma06g07880.1                                                       181   6e-46

>Glyma04g07810.1 
          Length = 1815

 Score =  237 bits (605), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 151/260 (58%), Positives = 175/260 (67%), Gaps = 25/260 (9%)

Query: 1   MLKTYSTALLAVCLTXXXXXXXXXXXLTSGLSAKLMRYLRLRVLGETSGSQIDTSHLTKS 60
           MLKTYST LLAVCL            LTSGLSAKLMRYLR+ VL ETSG+Q D +H+T+S
Sbjct: 163 MLKTYSTGLLAVCLVGQGPIVEDV--LTSGLSAKLMRYLRISVLRETSGNQKDVTHITES 220

Query: 61  RHSSGDISVRGKDDGRSRFRQQLLESSHLDDDARVIDERSLDDLTLDRGQDRSISGQTCQ 120
           RH+S + S RG+DDGR RFRQ LLES+HLDD  R+IDERSLDD+TL+R            
Sbjct: 221 RHASANTSGRGRDDGRGRFRQ-LLESNHLDD-TRMIDERSLDDVTLER------------ 266

Query: 121 EISWIDGEPPYWLN-EGADICEVDSDGEERWHCRDICDGRIKYGEQXXXXXXXXXXXXXX 179
                DGEPP  L  EGAD+ EVDSDGE+RWHCRDI DGRIKYGE               
Sbjct: 267 -----DGEPPDGLGGEGADVHEVDSDGEDRWHCRDIRDGRIKYGEHDDNIRDDSSRRRAN 321

Query: 180 XXXXXXXXKGTVNDGTVESELVLSPPGSGSRLGQGHSVRDRSIVRNADVRRVPDSKKTLA 239
                   KG +++G VES+ +LS PGSGSRLGQG SVRDRSI+RNAD+RRV DSKKTL 
Sbjct: 322 RGWGRSRGKGRLSEGVVESDPILSSPGSGSRLGQGRSVRDRSILRNADIRRVTDSKKTLG 381

Query: 240 RNTSED---SVFERKDNDEC 256
           R T  +   S  ER+DND+C
Sbjct: 382 RTTPSEASASASEREDNDDC 401


>Glyma06g07880.1 
          Length = 1814

 Score =  181 bits (460), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/256 (46%), Positives = 137/256 (53%), Gaps = 61/256 (23%)

Query: 1   MLKTYSTALLAVCLTXXXXXXXXXXXLTSGLSAKLMRYLRLRVLGETSGSQIDTSHLTKS 60
           MLKTYST LLAVCL            LTSGLSAKLMRYLR+ VLGETSG+Q D +H+T+S
Sbjct: 174 MLKTYSTGLLAVCL--DGQGQIVEDVLTSGLSAKLMRYLRISVLGETSGNQKDVTHITES 231

Query: 61  RHSSGDISVRGKDDGRSRFRQQLLESSHLDDDARVIDERSLDDLTLDRGQDRSISGQTCQ 120
           RH+S + S                                       RG+D         
Sbjct: 232 RHASTNTSA--------------------------------------RGRD--------- 244

Query: 121 EISWIDGEPPYWLNEGADICEVDSDGEERWHCRDICDGRIKYGEQXXXXXXXXXXXXXXX 180
                DG        G D+ +VDSDGE+ W CRDI DGRIKYGE                
Sbjct: 245 -----DGR-------GTDVHKVDSDGEDTWRCRDIRDGRIKYGEHDDNIRDDSSRRRANR 292

Query: 181 XXXXXXXKGTVNDGTVESELVLSPPGSGSRLGQGHSVRDRSIVRNADVRRVPDSKKTLAR 240
                  KG VN+G VES+ +LS PGSGSRLGQG SVRDRSI+RNADVRR  DSKKTL R
Sbjct: 293 GWGRSRGKGRVNEGAVESDPILSSPGSGSRLGQGRSVRDRSILRNADVRRGADSKKTLGR 352

Query: 241 NTSEDSVFERKDNDEC 256
             SE S FER+D+D+C
Sbjct: 353 IPSEASAFEREDDDDC 368