Miyakogusa Predicted Gene

Lj0g3v0201469.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201469.1 Non Chatacterized Hit- tr|I1JU86|I1JU86_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39995 PE,44.76,5e-18,
,CUFF.12795.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g33230.1                                                       101   2e-22
Glyma04g06650.1                                                        95   1e-20
Glyma14g13320.1                                                        93   7e-20
Glyma06g06730.1                                                        90   6e-19

>Glyma17g33230.1 
          Length = 667

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 71/105 (67%), Gaps = 7/105 (6%)

Query: 8   ISCNAPFKGWDNHNQNSTYHSHVGGNSIGSMI-PANGDPVNSA------FNFCDPLQMNH 60
           IS N PF GWD+HN +S+YHS+V GNSI S+I P     +NS       FNFCDPLQM H
Sbjct: 537 ISNNVPFLGWDDHNHDSSYHSNVIGNSIDSLIDPEGHTSINSTYNRNLDFNFCDPLQMKH 596

Query: 61  DEIIELTEECSIKPHQLHVMDQQRYQNSSICNSLGSPEDLDSAMM 105
           D I+ L++E S+K    ++M+QQ+ QNS   N++GS ED  S+MM
Sbjct: 597 DGIMGLSDENSLKQQHRYIMNQQKSQNSRAPNNIGSLEDFVSSMM 641


>Glyma04g06650.1 
          Length = 630

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 15/105 (14%)

Query: 1   MTPVPWNISCNAPFKGWDNHNQNSTYHSHVGGNSIGSMIPANGDPVNSAFNFCDPLQMNH 60
            T  P + S N PF+GWD+HNQ++T+HS++               +N  FN+CDPLQM H
Sbjct: 540 FTNRPGHTSSNVPFQGWDDHNQDATHHSNI---------------INLDFNYCDPLQMKH 584

Query: 61  DEIIELTEECSIKPHQLHVMDQQRYQNSSICNSLGSPEDLDSAMM 105
           +  +ELT+E  +K HQ + MDQQ+ Q +   N+LGS EDL S+MM
Sbjct: 585 EGFVELTDETLLKQHQGNTMDQQKSQENHFSNNLGSLEDLVSSMM 629


>Glyma14g13320.1 
          Length = 642

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 7/105 (6%)

Query: 8   ISCNAPFKGWDNHNQNSTYHSHVGGNSIGSMI-PANGDPVNS------AFNFCDPLQMNH 60
           +S N PF+GWD++N +S Y ++V GNSI ++I P     +NS       FNFC+PLQM H
Sbjct: 527 MSNNVPFQGWDDNNHDSNYDANVIGNSIDTLIDPEGHTSINSNYNRNLDFNFCNPLQMKH 586

Query: 61  DEIIELTEECSIKPHQLHVMDQQRYQNSSICNSLGSPEDLDSAMM 105
           D I+ L+EE S+K    ++M++Q+ QNSS  N+LGS ED  S+MM
Sbjct: 587 DGIMGLSEENSLKQQYGYIMNRQKSQNSSATNNLGSLEDFASSMM 631


>Glyma06g06730.1 
          Length = 690

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 15/118 (12%)

Query: 1   MTPVPWNISCNAPFKGWDNHNQNSTYHSHVGGNSIGSMIPANGDPV-------NSA---- 49
            T  P +IS N P++GW ++NQ++T+HS++   SI S+ P NG  V       NSA    
Sbjct: 534 FTNRPGHISSNVPYQGWHDNNQDATHHSNIL--SINSLTPVNGAAVPAGHAAMNSALHRN 591

Query: 50  --FNFCDPLQMNHDEIIELTEECSIKPHQLHVMDQQRYQNSSICNSLGSPEDLDSAMM 105
             FN+CDPLQM H+  +ELT+E   K HQ ++M+  + Q S   N+LGS EDL S+MM
Sbjct: 592 LDFNYCDPLQMKHEGFVELTDEALSKQHQGNIMNLPKSQQSHFSNNLGSLEDLVSSMM 649