Miyakogusa Predicted Gene

Lj0g3v0201389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201389.1 Non Chatacterized Hit- tr|I3SKZ0|I3SKZ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.76,0,FIBRILLARIN,Fibrillarin; FIBRILLARIN,Fibrillarin,
conserved site; RRNA 2-O-METHYLTRANSFERASE FIBRILL,CUFF.12805.1
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g36090.1                                                       304   4e-83
Glyma18g02340.1                                                       300   5e-82
Glyma04g37770.1                                                       300   5e-82
Glyma06g17310.1                                                       299   1e-81
Glyma15g23670.1                                                       153   9e-38
Glyma10g31490.1                                                        65   5e-11
Glyma09g25300.1                                                        55   5e-08

>Glyma11g36090.1 
          Length = 246

 Score =  304 bits (779), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 148/157 (94%), Positives = 155/157 (98%), Gaps = 1/157 (0%)

Query: 47  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVWNPFR 106
           S+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ EDGTKEEYRVWNPFR
Sbjct: 5   SKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDGTKEEYRVWNPFR 63

Query: 107 SKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLV 166
           SKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSGRDLV
Sbjct: 64  SKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLV 123

Query: 167 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVA 203
           NMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVA
Sbjct: 124 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 160


>Glyma18g02340.1 
          Length = 313

 Score =  300 bits (769), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 146/157 (92%), Positives = 155/157 (98%), Gaps = 1/157 (0%)

Query: 47  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVWNPFR 106
           S+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ EDG+K+EYRVWNPFR
Sbjct: 72  SKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVWNPFR 130

Query: 107 SKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLV 166
           SKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSGRDLV
Sbjct: 131 SKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLV 190

Query: 167 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVA 203
           NMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVA
Sbjct: 191 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 227


>Glyma04g37770.1 
          Length = 306

 Score =  300 bits (769), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 146/157 (92%), Positives = 155/157 (98%), Gaps = 1/157 (0%)

Query: 47  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVWNPFR 106
           S+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ EDG+K+EYRVWNPFR
Sbjct: 65  SKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRVWNPFR 123

Query: 107 SKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLV 166
           SKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSGRDLV
Sbjct: 124 SKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLV 183

Query: 167 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVA 203
           NMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVA
Sbjct: 184 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 220


>Glyma06g17310.1 
          Length = 246

 Score =  299 bits (766), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/157 (92%), Positives = 154/157 (98%), Gaps = 1/157 (0%)

Query: 47  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVWNPFR 106
           S+VVV+PHRH+GIFIAKG KEDALVTKNLVPGEAVYNEKR+TVQ ED +K+EYRVWNPFR
Sbjct: 5   SKVVVQPHRHDGIFIAKG-KEDALVTKNLVPGEAVYNEKRITVQNEDSSKDEYRVWNPFR 63

Query: 107 SKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSHRSGRDLV 166
           SKLAAAILGGVDNIWIKPGA+VLYLGAASGTTVSHVSD+VGPTGVVYAVEFSHRSGRDLV
Sbjct: 64  SKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLV 123

Query: 167 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVVFSDVA 203
           NMAKKRTNVIPIIEDARHPAKYRMLVGMVDV+FSDVA
Sbjct: 124 NMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVA 160


>Glyma15g23670.1 
          Length = 164

 Score =  153 bits (387), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 77/94 (81%), Positives = 84/94 (89%), Gaps = 1/94 (1%)

Query: 47  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVTVQKEDGTKEEYRVWNPFR 106
           S+VVV+PHRH+GIFIAKG KEDALVTKNLV GEAVYNEKR+ VQ EDG+K+EYRVW PFR
Sbjct: 41  SKVVVQPHRHDGIFIAKG-KEDALVTKNLVHGEAVYNEKRIIVQNEDGSKDEYRVWIPFR 99

Query: 107 SKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVS 140
           SKL AAILGGV NIWIKP AKVLYLG ASGT V+
Sbjct: 100 SKLVAAILGGVYNIWIKPRAKVLYLGTASGTDVA 133


>Glyma10g31490.1 
          Length = 74

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/31 (90%), Positives = 30/31 (96%)

Query: 92  EDGTKEEYRVWNPFRSKLAAAILGGVDNIWI 122
           EDG+K+EYRVWNPF SKLAAAILGGVDNIWI
Sbjct: 2   EDGSKDEYRVWNPFPSKLAAAILGGVDNIWI 32


>Glyma09g25300.1 
          Length = 100

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 36/42 (85%), Gaps = 2/42 (4%)

Query: 47  SRVVVEPHRHEGIFIAKGGKEDALVTKNLVPGEAVYNEKRVT 88
           S+V+V+P+RH+G FIAK  K+DA+V KNLV  EAVYNEKR+T
Sbjct: 61  SKVMVQPYRHDGFFIAK-DKKDAIV-KNLVLSEAVYNEKRIT 100