Miyakogusa Predicted Gene

Lj0g3v0199689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199689.1 Non Chatacterized Hit- tr|B4FQZ1|B4FQZ1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,26.84,0.00000000003,zf-met,NULL; U1-like zinc finger,Zinc finger,
U1-type; zinc finger,Zinc finger, C2H2-like; seg,NULL;,CUFF.12654.1
         (517 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g03930.1                                                       325   8e-89
Glyma11g17250.1                                                       186   6e-47
Glyma01g33020.1                                                       154   3e-37
Glyma08g26510.1                                                        70   6e-12
Glyma18g49990.1                                                        56   1e-07

>Glyma03g03930.1 
          Length = 448

 Score =  325 bits (833), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 223/500 (44%), Positives = 275/500 (55%), Gaps = 78/500 (15%)

Query: 4   DYTNYNXXXXXXXXXXSYELQYDPSQV--QPYDPSQIXXXXXXXXXXXXXXXXXXXXXXX 61
           DY++Y+           +   YDPSQ+  QPYD                           
Sbjct: 2   DYSDYSYQQQPQQ----HSYGYDPSQIPIQPYD--------QSYAAYQQYYAYNPQYAYY 49

Query: 62  XDTHQPHHLQFQPEPSPVHPPGVIPAAAEPGLARPSHGSAGPSQYXXXXXXXXXXXXXXX 121
            + HQ    QFQPE +P+HPPGV PAA EP          GPSQY               
Sbjct: 50  PNAHQ-TQFQFQPETAPLHPPGVNPAALEPT-------PTGPSQYRGRGGRGGRPFRGAG 101

Query: 122 XXXXXXXXXXXXXXXXXXXXXFPSHTSGPAISDVXXXXXXXXXTSSISGQMTIPNSAEVP 181
                                 PSH+SGPA S+                         VP
Sbjct: 102 RGRGHGRGHGMGGGRH-----IPSHSSGPAFSN-------------------------VP 131

Query: 182 AASAQPL-SRKMYCEVCKAECNSPEIMEQHKNGKRHKKNMKIHEELQRRNNLNGQQSGQI 240
           A    P+  RK+ CE+CK ECNSPEI+EQHK G++H+KNM++HEE QRRN +NGQQS +I
Sbjct: 132 ARVQPPVPPRKVCCEICKVECNSPEILEQHKVGRKHQKNMRVHEESQRRNAINGQQSEKI 191

Query: 241 PTSQVNLADHPQKVQNSEKKECPTENMGSEITADYDKNEIKLQNNVGETSEVPAEGPEGN 300
           PTSQ+NL D P++VQ SEK ECPTENMGS +  +  K E++LQNNVG  SEVPAE PEG 
Sbjct: 192 PTSQLNLTDQPKEVQESEKNECPTENMGSGVIINSHKEEMQLQNNVGNISEVPAEVPEGK 251

Query: 301 TTDNSALGDRGLKRKMRGGKVRRNAKKTT-AQLSEAEQPTTFICELCNAKCESPAVYNSH 359
           T DNSA   +GLKRK +GGK  +  +    ++  E  Q  +F CELC+ KCES  VY SH
Sbjct: 252 TEDNSAARGQGLKRKKKGGKGGKYMRTNDGSKPVEPAQTMSFRCELCDVKCESQVVYQSH 311

Query: 360 MAGKKHLANLKRANGSQALPGAGKQTSSTVVHQPLPG-VSGLQALYPSDVNALANAINTQ 418
           +AGKKHL+ L+RA+      G G+        Q L G + GLQA+YP D+NAL+NAIN Q
Sbjct: 312 VAGKKHLSKLRRASS-----GVGQHQ-----QQALSGALLGLQAIYPPDINALSNAINVQ 361

Query: 419 VQQGDNDPQILLAQLLMTVISQGQGQAPAIPPTGPLAGQIPEPSSVPGLSHEQQLAQTQV 478
           VQQGDNDPQ+LLAQLLMTV+SQ Q  A A P TG +  QIP P+S+ G S+E QL QT  
Sbjct: 362 VQQGDNDPQVLLAQLLMTVLSQAQVPATA-PVTGGVVAQIPVPTSMAGPSYEPQLLQT-- 418

Query: 479 SDITAHVEMENPAGETNNEL 498
                     NP+GET  EL
Sbjct: 419 ----------NPSGETKTEL 428


>Glyma11g17250.1 
          Length = 254

 Score =  186 bits (472), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/266 (45%), Positives = 153/266 (57%), Gaps = 34/266 (12%)

Query: 268 GSEITADYDKNEIKLQNNVGETSEVPAEGPEGNTTDNSALGDRGLKRKMRGGKVRRNAKK 327
           GSE TAD   +  +LQNNV   SEV  E P+    DNSA+  RG KRKMRGG+  +  + 
Sbjct: 1   GSEATADNHNDGTELQNNVEGVSEVQTEEPQEKPRDNSAIQGRGFKRKMRGGRGGKYMRS 60

Query: 328 TTAQLSEAEQP-----TTFICELCNAKCESPAVYNSHMAGKKHLANLKRANGSQALPGAG 382
                   E P     T+ ICELCN KC+S  VYNSH+AGKKHL+N KR +G        
Sbjct: 61  DDGSRKSVETPKPKQVTSLICELCNVKCDSQVVYNSHLAGKKHLSNFKRVHG-------- 112

Query: 383 KQTSSTVVHQPLPGVSGLQALYPSDVNALANAINTQVQQ------GDNDPQILLAQLLMT 436
                   +QPL G +G+Q L+P ++ AL+NA N  VQQ      G NDP+ LLAQLLM 
Sbjct: 113 --------YQPLNGEAGIQPLHPPNIIALSNANNFPVQQGVSVPLGINDPRNLLAQLLMN 164

Query: 437 VISQGQGQAPAIPP-TGPLAGQIPEPSSVPGLSHE---QQLAQTQVSDITAHVEMENPAG 492
           V+S    Q PA  P +GP+A QI  P+ + G SHE   Q L+Q QVSD  AH E ENP G
Sbjct: 165 VLS--NVQVPATTPLSGPVAAQIQVPALMAGSSHEPLSQNLSQIQVSDSLAHFESENPIG 222

Query: 493 ETNNELLSEQ-QLAQTQVSDITAHVE 517
           ET +++ S   QL +T  S    ++E
Sbjct: 223 ETKDQMSSVTFQLDETAGSSNNGNIE 248


>Glyma01g33020.1 
          Length = 156

 Score =  154 bits (388), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/160 (55%), Positives = 106/160 (66%), Gaps = 26/160 (16%)

Query: 340 TFICELCNAKCESPAVYNSHMAGKKHLANLKRANGSQALPGAGKQTSSTVVHQPLPG-VS 398
           +F CELC+ KCES  VY SHM GKKHL+ L+RA+      G G+Q       Q L G +S
Sbjct: 2   SFRCELCDVKCESQVVYQSHMTGKKHLSKLRRASS-----GVGQQ-------QALSGALS 49

Query: 399 GLQALYPSDVNALANAINTQVQQGDNDPQILLAQLLMTVISQGQGQAPAIPPTGPLAGQI 458
           GLQA+YP D+NAL+NAIN QVQQGDNDPQ+LLAQLLMTV+SQ Q  A A P TG +A QI
Sbjct: 50  GLQAVYPPDINALSNAINAQVQQGDNDPQVLLAQLLMTVLSQAQVPATA-PVTGAIASQI 108

Query: 459 PEPSSVPGLSHEQQLAQTQVSDITAHVEMENPAGETNNEL 498
           P P+S+ G S+E QL QT            N +GET  EL
Sbjct: 109 PAPTSMAGPSYEPQLLQT------------NSSGETKTEL 136


>Glyma08g26510.1 
          Length = 302

 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 57/184 (30%)

Query: 193 YCEVCKAECNSPEIMEQHKNGKRHKKNMKIHEELQRRNNLNGQQSGQIPTSQVNLADHPQ 252
           +CEVCK EC S ++++QHK GK+HKKN++     + R +L                  P 
Sbjct: 167 FCEVCKIECTSKDVLDQHKLGKKHKKNVE-----KLRESLT-----------------PT 204

Query: 253 KVQNSEKKECPTENMGSEITADYDKNEIKLQNNVGETSEVPAEGPEGNTTDNSALGDRGL 312
           +VQ S                                S  P  GP+    D+ +    G 
Sbjct: 205 QVQPS-------------------------------VSSKPLIGPQ--LPDDKSKSTSGN 231

Query: 313 KRKMRGGKVRRNAKKTTAQLSE--AEQPTTFICELCNAKCESPAVYNSHMAGKKHLANLK 370
           K K +  +   + +K   ++ E  A      IC +CN  C S  VYN H+AG+KH A LK
Sbjct: 232 KSKRKKVETAEDLEKKKMKVLEGGAAASAVKICAICNVVCNSETVYNYHLAGQKHAAMLK 291

Query: 371 RANG 374
           +A+G
Sbjct: 292 KASG 295


>Glyma18g49990.1 
          Length = 296

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 68/182 (37%), Gaps = 53/182 (29%)

Query: 193 YCEVCKAECNSPEIMEQHKNGKRHKKNMKIHEELQRRNNLNGQQSGQIPTSQVNLADHPQ 252
           +CEVCK EC   E+++QHK G   KK+ K  E+L  R +L                  P 
Sbjct: 161 FCEVCKIECTGKEVLDQHKLG---KKHKKNVEKL--RESLT-----------------PT 198

Query: 253 KVQNSEKKECPTENMGSEITADYDKNEIKLQNNVGETSEVPAEGPEGNTTDNSALGDRGL 312
           +VQ S                                S  P  GP+       ++     
Sbjct: 199 QVQPS-------------------------------GSSKPLIGPQLPDDKGKSISGNKS 227

Query: 313 KRKMRGGKVRRNAKKTTAQLSEAEQPTTFICELCNAKCESPAVYNSHMAGKKHLANLKRA 372
           KRK          KK    +  A      IC +CN  C S  VYN H+AG+KH A  K+A
Sbjct: 228 KRKKVETAEDLEKKKMKVLMGGAAASAVKICAICNVVCNSETVYNYHLAGQKHAAMQKKA 287

Query: 373 NG 374
           +G
Sbjct: 288 SG 289