Miyakogusa Predicted Gene

Lj0g3v0199409.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199409.1 Non Chatacterized Hit- tr|I1KIC6|I1KIC6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,27.82,0.0000000000002,no description,NULL;
RNI-like,NULL,CUFF.12636.1
         (383 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07890.1                                                        82   8e-16
Glyma03g01250.1                                                        50   6e-06

>Glyma07g07890.1 
          Length = 377

 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 69/284 (24%)

Query: 3   IKAHTKVSEFLRLCGTKTITRFHIKCKSNIHHCWQPWNDLDLERNTGPCCLFHIQEFVDA 62
           +K +  V  FL L  T+ I+RFH++C ++                   CCL + +E+V+A
Sbjct: 65  MKLYHSVDVFLGLFRTQKISRFHLRCNND-------------------CCLSYAEEWVNA 105

Query: 63  AIAVKVEQLSISMAQHGNRNYEHVFMSQHRNHGPVFFVPANLFNCATIVTLKLEGPFILH 122
            ++ KVE ++IS+    +                + F   +LF C T+VTLK+EG F   
Sbjct: 106 VVSRKVEHVNISLCMCRS----------------IIFRFPHLFICTTLVTLKIEGLFPFS 149

Query: 123 VPSRIQLSSLKSLHLNVRKCE--PSCKKFLSGSPALQFFYLNEINNLRLKEFRAERNSQG 180
           +P  + L +L+  HL+V      PS  K +SGSPAL+ F L +       +   + NSQ 
Sbjct: 150 IPYDVHLPNLQIFHLHVNALLSFPSINKLISGSPALELFDLKQNWWESQLKILLKHNSQV 209

Query: 181 NLIVSNN------LRNLHEYDY-----------------VYMTLHKVDDHSH----VVSM 213
             +  ++      +++  +YD+                 V +T+H    + +    V ++
Sbjct: 210 IQVFHHSSFYGLVIQDDRDYDFISNCMYTHRWPNILKAKVCLTVHHCAKNLYANQIVSNI 269

Query: 214 LNAMQNVEFLC--DWKEMMEVNHHCSIDSPQFPNLVHLELRLRN 255
           L  + NVEFL   D++E M+ +    +D P F NLV L L L+N
Sbjct: 270 LQGLCNVEFLSLGDFREEMDPS---ILDLPNFENLVDLRLFLKN 310



 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 3/132 (2%)

Query: 254 RNNVVSLPINLFTCTTLVNLKIEGSFTLSVPSCIQLSSLKRLHLNLRNCEP-ASCKAILS 312
           R+ +   P +LF CTTLV LKIEG F  S+P  + L +L+  HL++       S   ++S
Sbjct: 122 RSIIFRFP-HLFICTTLVTLKIEGLFPFSIPYDVHLPNLQIFHLHVNALLSFPSINKLIS 180

Query: 313 GSPALEFFHLKHEWRDGFEDLIIERNSGANLIVSKNQLINLVIQSDGGYDCFQDYFEGH- 371
           GSPALE F LK  W +    ++++ NS    +   +    LVIQ D  YD   +    H 
Sbjct: 181 GSPALELFDLKQNWWESQLKILLKHNSQVIQVFHHSSFYGLVIQDDRDYDFISNCMYTHR 240

Query: 372 LENIVKAKVFMT 383
             NI+KAKV +T
Sbjct: 241 WPNILKAKVCLT 252


>Glyma03g01250.1 
          Length = 121

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 40/135 (29%)

Query: 3   IKAHTKVSEFLRLCGTKTITRFHIKCKSNIHHCWQPWNDLDLERNTGPCCLFHIQEFVDA 62
           ++ H  + EFL    T+ I RF +KC                  N+  CC F ++E+VD 
Sbjct: 26  MEYHGSMDEFLGRQRTRKIMRFRLKC------------------NSDDCCSFDVEEWVDE 67

Query: 63  AIAVKVEQLSISMAQHGNRNYEHVFMSQHRNHGPVFFVPANLFNCATIVTLKLEGPFILH 122
            +  KV+ ++IS+               +  H  VF + A LF C T+VT      F   
Sbjct: 68  VVTRKVKHVNISL---------------YMCHSSVFNLAA-LFVCTTLVT------FDFS 105

Query: 123 VPSRIQLSSLKSLHL 137
           +P  + L +LKS HL
Sbjct: 106 IPCNVHLPNLKSFHL 120