Miyakogusa Predicted Gene

Lj0g3v0199269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199269.1 Non Chatacterized Hit- tr|C6T2R6|C6T2R6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31767
PE,86.49,0,seg,NULL; SAP18,Sin3 associated polypeptide
p18,CUFF.12625.1
         (152 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g02240.1                                                       232   1e-61
Glyma07g08900.1                                                       211   3e-55
Glyma20g32760.1                                                       141   2e-34
Glyma14g23800.1                                                        69   2e-12

>Glyma03g02240.1 
          Length = 151

 Score =  232 bits (591), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/119 (93%), Positives = 116/119 (97%)

Query: 33  VDREKTCPLLLRVFTKIGGHHTMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPA 92
           VDREKTCPLLLRVFTKIG HH+MEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPA
Sbjct: 33  VDREKTCPLLLRVFTKIGSHHSMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPA 92

Query: 93  ARRRKAKLSFAFVFPDKNGRFKVQEVGKTLSFGTGRLDDGKALADLGFEIGDYLDVSII 151
           ARRR AKLSFAFVFPDKNGRFKVQEVGKTLS+G GRLDDGKALA+LGFEIGDYLDV+I+
Sbjct: 93  ARRRNAKLSFAFVFPDKNGRFKVQEVGKTLSYGNGRLDDGKALAELGFEIGDYLDVAIL 151


>Glyma07g08900.1 
          Length = 765

 Score =  211 bits (536), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 100/117 (85%), Positives = 107/117 (91%), Gaps = 5/117 (4%)

Query: 33  VDREKTCPLLLRVFTKIGGHHTMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPA 92
           +DREKTCPLLLRVFTKIG HH+MEDFAVRGKEP+DEVQIYTWKDATLRELTDLVKEVAPA
Sbjct: 648 IDREKTCPLLLRVFTKIGSHHSMEDFAVRGKEPEDEVQIYTWKDATLRELTDLVKEVAPA 707

Query: 93  ARRRKAKLSFAFVFPDKNGRFKVQ-----EVGKTLSFGTGRLDDGKALADLGFEIGD 144
           ARRR AKLSFAF+FPDKNGRFK +      VGKTLS+G GRLDDGKALA+LGFEIGD
Sbjct: 708 ARRRNAKLSFAFIFPDKNGRFKRRGMNAIAVGKTLSYGNGRLDDGKALAELGFEIGD 764


>Glyma20g32760.1 
          Length = 111

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/83 (81%), Positives = 73/83 (87%)

Query: 33  VDREKTCPLLLRVFTKIGGHHTMEDFAVRGKEPKDEVQIYTWKDATLRELTDLVKEVAPA 92
           ++ +KT PLLL VFTKIG HH+MEDF VRGKE KDEVQIYTWKDATLRELT+LVKEVA  
Sbjct: 29  INHKKTRPLLLIVFTKIGSHHSMEDFVVRGKESKDEVQIYTWKDATLRELTNLVKEVALT 88

Query: 93  ARRRKAKLSFAFVFPDKNGRFKV 115
           ARRR AKLSFAFVFPDKN RFKV
Sbjct: 89  ARRRNAKLSFAFVFPDKNDRFKV 111


>Glyma14g23800.1 
          Length = 36

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/36 (80%), Positives = 32/36 (88%)

Query: 38 TCPLLLRVFTKIGGHHTMEDFAVRGKEPKDEVQIYT 73
          TCPLLL+VF KI  HH+MEDF +RGKEPKDEVQIYT
Sbjct: 1  TCPLLLQVFAKIRSHHSMEDFVIRGKEPKDEVQIYT 36