Miyakogusa Predicted Gene

Lj0g3v0198799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0198799.1 tr|Q8H6U4|Q8H6U4_PRUDU Heat shock protein 60
(Fragment) OS=Prunus dulcis GN=HSP60 PE=2 SV=1,75,0.00002,
,CUFF.12598.1
         (85 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g33910.1                                                        52   2e-07
Glyma20g19980.1                                                        50   5e-07
Glyma10g25630.1                                                        50   5e-07
Glyma10g33680.1                                                        48   2e-06

>Glyma20g33910.1 
          Length = 575

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/29 (72%), Positives = 27/29 (93%)

Query: 50  QRVTISKDDTLILDGADDKKVIEERCKQV 78
           +++TISKDDT+ILDGA DKK IEERC+Q+
Sbjct: 352 KKITISKDDTVILDGAGDKKAIEERCEQI 380


>Glyma20g19980.1 
          Length = 575

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/29 (65%), Positives = 27/29 (93%)

Query: 50  QRVTISKDDTLILDGADDKKVIEERCKQV 78
           +++T+SKDDT+ILDGA DKK +EERC+Q+
Sbjct: 352 KKITVSKDDTVILDGAGDKKALEERCEQI 380


>Glyma10g25630.1 
          Length = 575

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/29 (65%), Positives = 27/29 (93%)

Query: 50  QRVTISKDDTLILDGADDKKVIEERCKQV 78
           +++T+SKDDT+ILDGA DKK +EERC+Q+
Sbjct: 352 KKITVSKDDTVILDGAGDKKALEERCEQI 380


>Glyma10g33680.1 
          Length = 577

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/29 (68%), Positives = 26/29 (89%)

Query: 50  QRVTISKDDTLILDGADDKKVIEERCKQV 78
           +++TISKDDT+ILDGA DKK IEER +Q+
Sbjct: 352 KKITISKDDTVILDGAGDKKAIEERSEQI 380