Miyakogusa Predicted Gene

Lj0g3v0198759.3
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0198759.3 Non Chatacterized Hit- tr|Q2RAU3|Q2RAU3_ORYSJ
Transcription initiation factor IIE, putative
OS=Oryza,56.76,6e-19,HTH_TFE_IIE,Transcription factor TFE/TFIIEalpha
HTH domain; coiled-coil,NULL; no description,Winged ,CUFF.12595.3
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g07910.1                                                       402   e-112
Glyma17g13090.1                                                       394   e-110
Glyma06g23400.1                                                       381   e-106
Glyma18g23310.1                                                       373   e-104
Glyma06g23400.2                                                       205   3e-53

>Glyma05g07910.1 
          Length = 465

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/201 (95%), Positives = 195/201 (97%)

Query: 7   KLVKLAARAFYDDLTSKGDNQPKSGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK 66
           +LVKLAARAFYDDLTSKGDNQPK+GRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK
Sbjct: 1   RLVKLAARAFYDDLTSKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK 60

Query: 67  QLRRTLRFFEEEKFITRDHRRETAKGAKIYSAAVAANADGQHTGKEGEEKVKLHTHSYCC 126
           QLRRTLRFFEEEK ITRDHRRETAKGAKIYSAAVAA ADGQ T KEGEEKVKLHTHSYCC
Sbjct: 61  QLRRTLRFFEEEKIITRDHRRETAKGAKIYSAAVAATADGQQTAKEGEEKVKLHTHSYCC 120

Query: 127 LDYAQIYDVTRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLISFEDEDFH 186
           LDYAQIYDV RYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRL+SFEDEDFH
Sbjct: 121 LDYAQIYDVIRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLVSFEDEDFH 180

Query: 187 CESCNGKLEVESDKIAAQEGG 207
           CESCNG+LEVESDKIAAQE G
Sbjct: 181 CESCNGRLEVESDKIAAQERG 201


>Glyma17g13090.1 
          Length = 463

 Score =  394 bits (1012), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/201 (92%), Positives = 191/201 (95%)

Query: 7   KLVKLAARAFYDDLTSKGDNQPKSGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK 66
           +L+KL ARAFYDDLTS GDNQPK+GRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK
Sbjct: 1   RLIKLGARAFYDDLTSTGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKDLKLHTK 60

Query: 67  QLRRTLRFFEEEKFITRDHRRETAKGAKIYSAAVAANADGQHTGKEGEEKVKLHTHSYCC 126
           QLRRTLRFFEEEK ITRDHRRETAKGAKIY AAVAA ADGQ T KEGEEKVKLHTHSYCC
Sbjct: 61  QLRRTLRFFEEEKIITRDHRRETAKGAKIYGAAVAATADGQQTAKEGEEKVKLHTHSYCC 120

Query: 127 LDYAQIYDVTRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLISFEDEDFH 186
           LDYAQIYDV RYRLHRMKHKLKDELENKNTLQEYIC NCGKRYNALDALRL+SFEDEDFH
Sbjct: 121 LDYAQIYDVIRYRLHRMKHKLKDELENKNTLQEYICSNCGKRYNALDALRLVSFEDEDFH 180

Query: 187 CESCNGKLEVESDKIAAQEGG 207
           CESCNG+LEVESDKIA QEGG
Sbjct: 181 CESCNGRLEVESDKIAVQEGG 201


>Glyma06g23400.1 
          Length = 469

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 179/207 (86%), Positives = 193/207 (93%)

Query: 1   MIEPYNKLVKLAARAFYDDLTSKGDNQPKSGRSDNRGIAVVVLDALTRRQWVREEDLAKD 60
           M++ YNKLVKLAARAFYDDLTSKG+NQPKSGRSDNRGIAVV+LDALTRRQWVREEDLAKD
Sbjct: 1   MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 60

Query: 61  LKLHTKQLRRTLRFFEEEKFITRDHRRETAKGAKIYSAAVAANADGQHTGKEGEEKVKLH 120
           LKLHTKQLRRTLRFFEEEK ITR++RRETAKGAK+YSAA AA  D Q TGKEGEEKVKLH
Sbjct: 61  LKLHTKQLRRTLRFFEEEKIITREYRRETAKGAKMYSAATAATVDVQLTGKEGEEKVKLH 120

Query: 121 THSYCCLDYAQIYDVTRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLISF 180
           THSYCCLDYAQIYDV RYR+HRMK  LKDEL+NKNT++EYIC  CGKRYNALDALRL+SF
Sbjct: 121 THSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSF 180

Query: 181 EDEDFHCESCNGKLEVESDKIAAQEGG 207
           ED+DFHCESCNGKLEVE+DK  AQEGG
Sbjct: 181 EDDDFHCESCNGKLEVENDKFVAQEGG 207


>Glyma18g23310.1 
          Length = 292

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 178/207 (85%), Positives = 192/207 (92%)

Query: 1   MIEPYNKLVKLAARAFYDDLTSKGDNQPKSGRSDNRGIAVVVLDALTRRQWVREEDLAKD 60
           M++ YNKLVKLAARAFYDDLTSKG+NQPKSGRSDNRGIAVV+LDALTRRQWVREEDLAKD
Sbjct: 1   MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKD 60

Query: 61  LKLHTKQLRRTLRFFEEEKFITRDHRRETAKGAKIYSAAVAANADGQHTGKEGEEKVKLH 120
           LKLHTKQLRRTLRFFEEEK ITR++RRE AKGAK+YSAA AA  D Q TGKEGEEKVKLH
Sbjct: 61  LKLHTKQLRRTLRFFEEEKIITREYRREAAKGAKMYSAATAATVDVQLTGKEGEEKVKLH 120

Query: 121 THSYCCLDYAQIYDVTRYRLHRMKHKLKDELENKNTLQEYICPNCGKRYNALDALRLISF 180
           THSYCCLDYAQ+YDV RYR+HRMK  LKDEL+NKNT++EYIC  CGKRYNALDALRL+SF
Sbjct: 121 THSYCCLDYAQVYDVVRYRIHRMKKLLKDELDNKNTIEEYICRKCGKRYNALDALRLVSF 180

Query: 181 EDEDFHCESCNGKLEVESDKIAAQEGG 207
           ED+DFHCESCNGKLEVESDK  AQEGG
Sbjct: 181 EDDDFHCESCNGKLEVESDKFVAQEGG 207


>Glyma06g23400.2 
          Length = 375

 Score =  205 bits (521), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 93/113 (82%), Positives = 101/113 (89%)

Query: 95  IYSAAVAANADGQHTGKEGEEKVKLHTHSYCCLDYAQIYDVTRYRLHRMKHKLKDELENK 154
           +YSAA AA  D Q TGKEGEEKVKLHTHSYCCLDYAQIYDV RYR+HRMK  LKDEL+NK
Sbjct: 1   MYSAATAATVDVQLTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNK 60

Query: 155 NTLQEYICPNCGKRYNALDALRLISFEDEDFHCESCNGKLEVESDKIAAQEGG 207
           NT++EYIC  CGKRYNALDALRL+SFED+DFHCESCNGKLEVE+DK  AQEGG
Sbjct: 61  NTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVENDKFVAQEGG 113