Miyakogusa Predicted Gene

Lj0g3v0197519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197519.1 Non Chatacterized Hit- tr|F6GU18|F6GU18_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,63.18,0,ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN,NULL; CALCIUM-ACTIVATED
CHLORIDE CHANNEL REGULAT,CUFF.12509.1
         (258 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g33640.1                                                        62   5e-10
Glyma01g23870.1                                                        54   2e-07
Glyma08g37060.1                                                        51   1e-06

>Glyma09g33640.1 
          Length = 541

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 4/141 (2%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           ++VV Q+++I++   +    +      S   R ++      I++GDLYAEEER+F + + 
Sbjct: 320 LNVVAQDVRIQLEVVSRSRAVEIAGVYSLSGRPVSLGSSDWIRLGDLYAEEEREFLVELK 379

Query: 61  VPADDSSDEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPDIARGVAVSIEVDKQRNRN 120
           VPA  S+    +L VR  YR+P T+E + + V   + + RP   R     IE  + RN +
Sbjct: 380 VPA-ASAGSHHVLTVRSSYRNPLTREPL-IPVEQAMLVPRPHAVRSSCAKIE--RLRNLH 435

Query: 121 LATEVMTEARVKAERGDFVAA 141
           +    + E+   AE  D   A
Sbjct: 436 VTARAVAESSRLAEHNDLSGA 456


>Glyma01g23870.1 
          Length = 648

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 1   MSVVVQELQIEVRCFNPCLQLSSVKAGSYQTRLINNARMACIKVGDLYAEEERDFFITMN 60
           +SV  Q+ ++E++  +   Q       S      +      + +GDL A EER+  +   
Sbjct: 423 LSVAAQDFKLELKLASRSAQAEITAVYSLAKGFTDALSPDSVALGDLCAAEERELLVEFK 482

Query: 61  VPADDSS--DEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQRPDIARGVAVSIEVDKQRN 118
           VPA  +S       + VR  +RDP T+E+V      E+ +  P   R   + IE  + R 
Sbjct: 483 VPAGTASRGSHHRFISVRCSHRDPFTQELVN-SKERELIVPGPHTVRSCDLRIE--QLRR 539

Query: 119 RNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSARAGDSLCVSLS---AELKEM 175
           R+++   + E+R    R D   A+  L S +     +VS   GD     L    AEL+  
Sbjct: 540 RHVSARAVAESRKCVARNDVSGALQLLSSAR----ASVSREQGDECLRWLEAKQAELRNQ 595

Query: 176 QERMENRRIYEQSG 189
           + R  N    E+ G
Sbjct: 596 KLRSSNNNCLEEKG 609


>Glyma08g37060.1 
          Length = 581

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)

Query: 42  IKVGDLYAEEERDFFITMNVPADDSS--DEMSLLIVRGLYRDPTTKEMVGLDVTSEVKIQ 99
           + +GDLYA E R+  + + VPA  +S      ++ VR  +RDP T+E+V +    E+ + 
Sbjct: 396 VALGDLYAAEGREILVELKVPAGTASRGSHQRVISVRCSHRDPFTRELV-ISKDRELNVP 454

Query: 100 RPDIARGVAVSIEVDKQRNRNLATEVMTEARVKAERGDFVAAVSTLESCQRALSETVSAR 159
           RP   R     IE  + R   ++   + E+R    R D   A+  L S +     +VS  
Sbjct: 455 RPRTVRSCDPRIE--RLRRCQVSARAVAESRRLMARNDVSGALELLSSAR----ASVSRE 508

Query: 160 AGDSLCVSLSAELKEMQ 176
            GD     L +E  E++
Sbjct: 509 QGDECLRWLESEQAELR 525