Miyakogusa Predicted Gene

Lj0g3v0197309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197309.1 tr|D4P3E6|D4P3E6_WHEAT ARF GTPase activator
(Fragment) OS=Triticum aestivum PE=2
SV=1,54.78,3e-19,seg,NULL,CUFF.12543.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g22360.2                                                       147   7e-36
Glyma12g22360.1                                                       147   8e-36
Glyma13g35740.1                                                       133   1e-31
Glyma12g34840.1                                                       125   2e-29
Glyma06g39690.1                                                       124   8e-29
Glyma11g32270.1                                                        99   3e-21

>Glyma12g22360.2 
          Length = 497

 Score =  147 bits (371), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 93/164 (56%), Gaps = 25/164 (15%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           MLSMDDP+EK SG ADATADDNNWAGFQSAAE S               + TSGIEDLFK
Sbjct: 236 MLSMDDPNEKGSGAADATADDNNWAGFQSAAEASTAEKTDATKAVESTPQSTSGIEDLFK 295

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXX---------------------- 98
           DSPS+TPSL +EKPQKDVKNDIMSLFEK+N+VSPF                         
Sbjct: 296 DSPSVTPSLTTEKPQKDVKNDIMSLFEKSNVVSPFAMHQQQLAMLAQQQSLLMAAAKSAG 355

Query: 99  ---XXXXXXXXXXXXXXXXXXXKSAGGDSKNSSSVQQPRANIPI 139
                                 KS GGDSK  +++QQP +NIP+
Sbjct: 356 GDPKYLASLQQQQSLLMAAAAAKSDGGDSKYPTAIQQPGSNIPV 399


>Glyma12g22360.1 
          Length = 500

 Score =  147 bits (370), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 93/164 (56%), Gaps = 25/164 (15%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           MLSMDDP+EK SG ADATADDNNWAGFQSAAE S               + TSGIEDLFK
Sbjct: 239 MLSMDDPNEKGSGAADATADDNNWAGFQSAAEASTAEKTDATKAVESTPQSTSGIEDLFK 298

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXX---------------------- 98
           DSPS+TPSL +EKPQKDVKNDIMSLFEK+N+VSPF                         
Sbjct: 299 DSPSVTPSLTTEKPQKDVKNDIMSLFEKSNVVSPFAMHQQQLAMLAQQQSLLMAAAKSAG 358

Query: 99  ---XXXXXXXXXXXXXXXXXXXKSAGGDSKNSSSVQQPRANIPI 139
                                 KS GGDSK  +++QQP +NIP+
Sbjct: 359 GDPKYLASLQQQQSLLMAAAAAKSDGGDSKYPTAIQQPGSNIPV 402


>Glyma13g35740.1 
          Length = 481

 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/139 (51%), Positives = 80/139 (57%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           MLSMD P+E  S  A  T DDN+WAGFQSAAE S                  SGIEDLFK
Sbjct: 242 MLSMDGPNENGSEAAGTTTDDNHWAGFQSAAEVSTAEKTSPLKAADSTPGSASGIEDLFK 301

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXXXXXXXXXXXXXXXXXXXXXKSA 120
           D   +TPSL  EKPQKDVKNDIMSLFEK NMVSPF                      KS+
Sbjct: 302 DLHPVTPSLTPEKPQKDVKNDIMSLFEKGNMVSPFSMHQQQLAMLAQQQSLLMASAAKSS 361

Query: 121 GGDSKNSSSVQQPRANIPI 139
           GGD +  +S+QQPR N+PI
Sbjct: 362 GGDPRYPASIQQPRPNVPI 380


>Glyma12g34840.1 
          Length = 484

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/140 (50%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           MLSMD P+E  S  A  T DDN+WAGFQSAAE S                  SGIEDLFK
Sbjct: 242 MLSMDGPNENGSEAAGTTTDDNHWAGFQSAAEVSTAEKTSPPKAADSTPVSASGIEDLFK 301

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXXXXXXXXXXXXXXXXXXXXXKSA 120
           D   +TPSL  EKPQKDVKNDIM LFEK N+VSPF                      KS 
Sbjct: 302 DLSPVTPSLTPEKPQKDVKNDIMRLFEKGNIVSPFSMHQQQLGMLAHQQSLLMAAAAKST 361

Query: 121 GGDSKNSSSVQQPR-ANIPI 139
           GGD +  +S+QQPR  N+PI
Sbjct: 362 GGDPRYPASIQQPRPPNVPI 381


>Glyma06g39690.1 
          Length = 484

 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 82/136 (60%), Gaps = 9/136 (6%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXX----XXXXXXXXXXRPTSGIE 56
           MLSMDDP+EK SG     A+DNNWAGFQSAAE S                   + TSGIE
Sbjct: 223 MLSMDDPNEKGSG----AANDNNWAGFQSAAEASEAEKTDAPKAIESTPQSTRQSTSGIE 278

Query: 57  DLFKDSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXXXXXXXXXXXXXXXXXXXX 116
           DLFKDSPS+TPSL  EKPQKD+KNDIMSLFEK+N+VSPF                     
Sbjct: 279 DLFKDSPSVTPSLTPEKPQKDLKNDIMSLFEKSNVVSPF-AMHQQQLAMLAQQQSLLMAA 337

Query: 117 XKSAGGDSKNSSSVQQ 132
            KSAGGD K  +S+QQ
Sbjct: 338 AKSAGGDPKYLASLQQ 353


>Glyma11g32270.1 
          Length = 272

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 56/88 (63%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           MLSMD P+E  S  A  T DDN+WAGFQSAAE S                  SGIEDLFK
Sbjct: 185 MLSMDGPNENGSEAAGTTTDDNHWAGFQSAAEVSTAEKTSPLKAADSTPASASGIEDLFK 244

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEK 88
           D   +TPSL  EKPQ+DVKNDIMSLFEK
Sbjct: 245 DLHPVTPSLTPEKPQRDVKNDIMSLFEK 272