Miyakogusa Predicted Gene
- Lj0g3v0197229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0197229.1 Non Chatacterized Hit- tr|I1M029|I1M029_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,83.02,9e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.12481.1
(362 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g01410.1 429 e-120
Glyma01g03880.1 275 5e-74
Glyma18g18550.1 265 5e-71
Glyma08g39910.1 265 8e-71
Glyma02g03810.1 263 2e-70
Glyma13g23970.1 101 2e-21
Glyma13g34350.1 92 8e-19
Glyma08g39920.2 58 2e-08
Glyma08g39920.1 58 2e-08
>Glyma19g01410.1
Length = 536
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/379 (61%), Positives = 252/379 (66%), Gaps = 27/379 (7%)
Query: 1 MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
MAIRKISDEG+TTIA PSEDAKFSNDFDVVY G SCSLLVVDRGN A
Sbjct: 168 MAIRKISDEGVTTIAGGKRGYAGGHVDG-PSEDAKFSNDFDVVYVGSSCSLLVVDRGNHA 226
Query: 61 IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
IREIQLHQDDCT Y D D+SF+LGI VL+A FFGYMLALLQWRVRAMFSSPDDPR
Sbjct: 227 IREIQLHQDDCTSYDED----DNSFNLGIVVLVAAAFFGYMLALLQWRVRAMFSSPDDPR 282
Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
P R KG PF A+Q Q R EDEF+KQDEGFFVSLGRL +NS + M
Sbjct: 283 APSRKKGAPFVAQQMQ-RPPPTTKSVRPPLIPNEDEFEKQDEGFFVSLGRLFLNSGTCMS 341
Query: 181 EILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDE-PPGIEART 239
EILG F+GSKRK L ANR+ N WPMQESFVIPD DE PP +E +T
Sbjct: 342 EILGGLFSGSKRKSL---QYHQYQQQYQYANRY-PNAWPMQESFVIPDEDEPPPSLETKT 397
Query: 240 PTLRKPYPFMPNEIEKPQQFKQTQGYLNRWDDGGYDEX----------------XXXXXX 283
PT R+ YP M E+EKPQ FK ++GYL RW+ G Y E
Sbjct: 398 PTPRETYPIMTKELEKPQHFKPSRGYLKRWEGGDYQEQHQQLQQHHQQHQQEHPKLQHQQ 457
Query: 284 XXXXXXXXXXXXVQNRYSSTPQGYYEQNRETNEIVFGAVQEHDGRREAMVIKAVDYGDPK 343
V RYSSTPQGYYEQN ETNEIVFGAVQEHDGRREAMVIKAVDYGDPK
Sbjct: 458 HQQQVKLQHQHQVHTRYSSTPQGYYEQNCETNEIVFGAVQEHDGRREAMVIKAVDYGDPK 517
Query: 344 FSHQNVRPRLNYVGYSHGY 362
++H N+RPRLNYVGYSHGY
Sbjct: 518 YTHHNIRPRLNYVGYSHGY 536
>Glyma01g03880.1
Length = 507
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/364 (45%), Positives = 207/364 (56%), Gaps = 22/364 (6%)
Query: 1 MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
MAIRKISD G+TTIA PSE+AKFSNDFDVVY G SCSLLV+DRGNQA
Sbjct: 164 MAIRKISDSGVTTIAGGKWSRGGGHVDG-PSEEAKFSNDFDVVYVGSSCSLLVIDRGNQA 222
Query: 61 IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
IREIQLH DDC Y ++ F LGIAVLI GFFGYMLALLQ R+ + +S D
Sbjct: 223 IREIQLHFDDCA------YQYENGFPLGIAVLIGAGFFGYMLALLQRRLGTIVASQDAEG 276
Query: 121 GPLR-TKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSM 179
+ +P+ R +EDE DKQ+E FF S+G+LL N+ +S+
Sbjct: 277 AAMSGISPSPYQKPLNSAR---------PPLIPSEDESDKQEESFFGSIGKLLTNAGASV 327
Query: 180 GEILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDEPPGIEART 239
EI+G+ F G ++ P P + N WP+QESFVIPD DEPP I+ RT
Sbjct: 328 VEIMGALFPGFRKNP-PQSYEFQSPPLFQQPQKQ-VNAWPVQESFVIPDEDEPPSIDPRT 385
Query: 240 PTLRKPYPFMPNEIEKPQQFKQTQGYLNRWDDGGYDEXXXXXXXXXXXXXXXXXXXVQNR 299
PT RK Y FM + EK QQ Q++ + + WD G +
Sbjct: 386 PTPRKTYAFMSKDAEKMQQLWQSRAFYSGWD--GDLQQQQQLKHQQQQQQQQLKHHRHQY 443
Query: 300 YSSTPQGYYEQNR-ETNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLNYVGY 358
+SS P YYEQ+ ETNEIVFGAVQE DG++ +VIK VDYG + H +RPR++ +G+
Sbjct: 444 HSSVPHTYYEQSHEETNEIVFGAVQEQDGKKGTVVIKPVDYGQSVYDHHYIRPRISSMGH 503
Query: 359 SHGY 362
+ Y
Sbjct: 504 INKY 507
>Glyma18g18550.1
Length = 453
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/364 (44%), Positives = 209/364 (57%), Gaps = 31/364 (8%)
Query: 1 MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
MAIRKISD G+TTIA PSE+AKFS+D DVVY G SCSLLV+DRGN+A
Sbjct: 119 MAIRKISDSGVTTIAGGKWNRGGGHVDG-PSEEAKFSDDLDVVYVGSSCSLLVIDRGNRA 177
Query: 61 IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
IREIQLH DDC Y S F LGIA+L+ GFFGYMLALLQ R+ + +S +
Sbjct: 178 IREIQLHFDDCA------YQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVASQEAQV 231
Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
+ T P + Q+ + +E E DKQ+EGFF SLG+LL N+ +SM
Sbjct: 232 PVMVTSSVPPSPYQKPLKSVRPPLIP------SEYEPDKQEEGFFGSLGKLLANTGASMV 285
Query: 181 EILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDEPPGIEARTP 240
EI+G F +RK L + N WP+QESFVIPD D+PP I+ R P
Sbjct: 286 EIIGGLFPSFRRKSL---RYQFQRQPLIQQPQKQVNAWPVQESFVIPDEDQPPSIDTRAP 342
Query: 241 TLRKPYPFMPNEIEKPQQFKQTQGYLNRWDDGGYDEXXXXXXXXXXXXXXXXXXXVQNRY 300
T RK YPFM + EK QQ +Q++ + + WD +++Y
Sbjct: 343 TPRKTYPFMSKDAEKMQQLRQSRAFYSGWDG------------DLQQQQQQQQKHHRHQY 390
Query: 301 -SSTPQGYYEQNRE-TNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLNYVGY 358
SS P YYEQ+ E TNEIVFGAV+E D ++E++VIK VDYG+ + H N+R R++ +GY
Sbjct: 391 RSSIPHTYYEQSHETTNEIVFGAVEEQDRKQESVVIKPVDYGESMYEH-NIRSRMSSMGY 449
Query: 359 SHGY 362
+ Y
Sbjct: 450 GYRY 453
>Glyma08g39910.1
Length = 515
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 202/363 (55%), Gaps = 30/363 (8%)
Query: 1 MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
MAIRKISD G+TTIA PSE+AKFS DFDV Y G SCSLLV+DRGN+A
Sbjct: 182 MAIRKISDSGVTTIAGGKWSRGGGHVDG-PSEEAKFSGDFDVAYVGSSCSLLVIDRGNRA 240
Query: 61 IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
IREIQLH DDC Y S F LGIA+L+ GFFGYMLALLQ R+ + SS +
Sbjct: 241 IREIQLHFDDCA------YQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVSSQEAQV 294
Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
T P + Q+ + AE E DKQ+EGFF SLG+L+ N+ SM
Sbjct: 295 PVTVTSSVPPSPYQKPFK------SVRPPLIPAECEPDKQEEGFFGSLGKLIANTGVSMV 348
Query: 181 EILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDEPPGIEARTP 240
EI+G F +RK L + N WP+QESFVIPD D+PP I+ R P
Sbjct: 349 EIMGGLFPSFRRKSL---SYQFQRQPLIQQPQKQVNAWPVQESFVIPDEDQPPSIDTRAP 405
Query: 241 TLRKPYPFMPNEIEKPQQFKQTQGYLNRWDDGGYDEXXXXXXXXXXXXXXXXXXXVQNRY 300
T RK YPFM + EK QQ +Q++ + + WD
Sbjct: 406 TPRKTYPFMSKDAEKMQQLRQSRAFYSGWDG------------DLQQQQQQKHHHRHQYR 453
Query: 301 SSTPQGYYEQNRE-TNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLNYVGYS 359
SS P YYEQ+ E TNEIVFGAVQE D ++E++VIK VDYG+ + QN+R R++ +GY
Sbjct: 454 SSIPHTYYEQSHETTNEIVFGAVQEQDRKQESVVIKPVDYGESMY-EQNIRSRMSSMGYG 512
Query: 360 HGY 362
+ Y
Sbjct: 513 YRY 515
>Glyma02g03810.1
Length = 509
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 206/366 (56%), Gaps = 24/366 (6%)
Query: 1 MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
MAIRKISD G+TTIA PSE+AKFSNDFDVVY G SCSLLV+DRGNQA
Sbjct: 164 MAIRKISDSGVTTIAGGKWSRGGGHIDG-PSEEAKFSNDFDVVYIGSSCSLLVIDRGNQA 222
Query: 61 IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
IREIQLH DDC Y ++ LGIA+L+ GFFGYMLALLQ R+ + +S D
Sbjct: 223 IREIQLHFDDCA------YQYENGLTLGIAMLVGAGFFGYMLALLQHRLGTIVAS-QDLE 275
Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
G + +P ++ K +EDE DKQ+E F S+G+LL N+ +S+
Sbjct: 276 GAAMSGISPSPYQKPLK-------SVRPPLIPSEDESDKQEESFIRSIGKLLTNAGASVV 328
Query: 181 EILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDEPPGIEARTP 240
EI+G+ F G ++KP + N WP+QESFVIPD DEPP I+ R+P
Sbjct: 329 EIMGALFPGFRKKP---QSYEFQSQPLFQQPQKQVNAWPVQESFVIPDEDEPPSIDPRSP 385
Query: 241 TLRKPYPFMPNEIEKPQQFKQTQGYLNRWDDGGYDEXXXXXXXXXXXXXXXXXXXVQNR- 299
T RK Y FM + EK Q Q+ + + W GG + +R
Sbjct: 386 TPRKTYAFMSQDAEKMPQLWQSHAFYSGW--GGDLQQQQQLKLQQQQQQQQQQQLKHHRH 443
Query: 300 --YSSTPQGYYEQNR-ETNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLNYV 356
+SS P YYEQ+ E NEIVFGAVQE +G++E +VIK VDYG + H +RPR + +
Sbjct: 444 LYHSSVPHTYYEQSHEEINEIVFGAVQEQEGKKETVVIKPVDYGQSLYDHHYIRPRNSSM 503
Query: 357 GYSHGY 362
G+ + Y
Sbjct: 504 GHINKY 509
>Glyma13g23970.1
Length = 246
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 308 YEQNRETNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLNYVGYS 359
++QN ETNEIVFGAVQEHDGRREAMVIK VDYGDPK++H N+RPRLNYVGYS
Sbjct: 33 HQQNCETNEIVFGAVQEHDGRREAMVIKVVDYGDPKYTHHNIRPRLNYVGYS 84
>Glyma13g34350.1
Length = 503
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 87/187 (46%), Gaps = 26/187 (13%)
Query: 1 MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
+AIRKI D G+TTIA PSEDAKFSNDFDVVY +CSLLV+DRGN A
Sbjct: 158 LAIRKIGDAGVTTIAGGKSNVAGYRDG--PSEDAKFSNDFDVVYVRPTCSLLVIDRGNAA 215
Query: 61 IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
+R+I L Q+DC +Y ++S I ++ GY +LQ
Sbjct: 216 LRQISLDQEDC------DYQSNSISSTDILTVVGAVIVGYATCMLQQGF----------- 258
Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
G+ F ++ QQ E K++ G + S G+L+V+ S
Sbjct: 259 ------GSSFFSKTQQPSQKQFKGLASNEKHMPILESSKEEPG-WPSFGQLIVDLSKLSL 311
Query: 181 EILGSFF 187
E L S F
Sbjct: 312 EALASTF 318
>Glyma08g39920.2
Length = 392
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 2 AIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQAI 61
AIRKIS +G+TTIA P+ +A FSNDFD+ + C+LLV D ++ +
Sbjct: 124 AIRKISAKGVTTIAGGEFSEKSRTKDG-PALNASFSNDFDLTFIPGLCALLVSDHMHRLV 182
Query: 62 REIQLHQDDCT 72
R+I L ++DCT
Sbjct: 183 RQINLMEEDCT 193
>Glyma08g39920.1
Length = 400
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 2 AIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQAI 61
AIRKIS +G+TTIA P+ +A FSNDFD+ + C+LLV D ++ +
Sbjct: 124 AIRKISAKGVTTIAGGEFSEKSRTKDG-PALNASFSNDFDLTFIPGLCALLVSDHMHRLV 182
Query: 62 REIQLHQDDCT 72
R+I L ++DCT
Sbjct: 183 RQINLMEEDCT 193