Miyakogusa Predicted Gene

Lj0g3v0196789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196789.1 Non Chatacterized Hit- tr|I1KE45|I1KE45_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52838 PE,69.49,2e-17,
,CUFF.12465.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g39650.3                                                       122   1e-28
Glyma06g39650.2                                                       122   1e-28
Glyma06g39650.1                                                        93   6e-20
Glyma12g22370.1                                                        72   1e-13

>Glyma06g39650.3 
          Length = 77

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 67/77 (87%)

Query: 1  MLESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVLNKILQLMSIQR 60
          M+E+G ++QP P K +WCE+KQAAVHEE+ RMNQLPA+S Y  HR+KVLNKILQLMS+QR
Sbjct: 1  MMETGDINQPEPLKQVWCEKKQAAVHEEMNRMNQLPANSAYATHRMKVLNKILQLMSVQR 60

Query: 61 TASQEEELEQLFAGLSL 77
          T SQE+ELE LFAGLSL
Sbjct: 61 TVSQEQELELLFAGLSL 77


>Glyma06g39650.2 
          Length = 77

 Score =  122 bits (305), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/77 (72%), Positives = 67/77 (87%)

Query: 1  MLESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVLNKILQLMSIQR 60
          M+E+G ++QP P K +WCE+KQAAVHEE+ RMNQLPA+S Y  HR+KVLNKILQLMS+QR
Sbjct: 1  MMETGDINQPEPLKQVWCEKKQAAVHEEMNRMNQLPANSAYATHRMKVLNKILQLMSVQR 60

Query: 61 TASQEEELEQLFAGLSL 77
          T SQE+ELE LFAGLSL
Sbjct: 61 TVSQEQELELLFAGLSL 77


>Glyma06g39650.1 
          Length = 79

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 51/59 (86%)

Query: 1  MLESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVLNKILQLMSIQ 59
          M+E+G ++QP P K +WCE+KQAAVHEE+ RMNQLPA+S Y  HR+KVLNKILQLMS+Q
Sbjct: 1  MMETGDINQPEPLKQVWCEKKQAAVHEEMNRMNQLPANSAYATHRMKVLNKILQLMSVQ 59


>Glyma12g22370.1 
          Length = 129

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 39/48 (81%)

Query: 2  LESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVL 49
          +E+G + QP P K +WCE KQA+VHEE++RMNQLPA+S YV HRLK +
Sbjct: 1  METGDISQPEPPKQVWCEEKQASVHEEIKRMNQLPANSSYVTHRLKTI 48