Miyakogusa Predicted Gene
- Lj0g3v0196679.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0196679.1 Non Chatacterized Hit- tr|B9R6Y6|B9R6Y6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.36,3e-19,seg,NULL,CUFF.12459.1
(180 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g04910.1 187 4e-48
Glyma06g05010.1 186 8e-48
Glyma17g35230.1 182 1e-46
Glyma14g09930.1 144 6e-35
Glyma18g15610.1 131 4e-31
Glyma06g35030.1 100 2e-21
Glyma01g45310.1 76 2e-14
Glyma20g27190.1 70 8e-13
Glyma10g40220.1 61 7e-10
Glyma10g40220.2 60 9e-10
>Glyma04g04910.1
Length = 184
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 137/187 (73%), Gaps = 17/187 (9%)
Query: 1 MDMSSSQYNSASESGWTHYFDQPSLSEKHFQ-RSGIVEY--KGMXXXXXXXDLSMVSDAS 57
MD+SSSQYNSA ESGWTHY D SLSE +FQ R GI ++ KG DLSM+SDAS
Sbjct: 1 MDISSSQYNSAGESGWTHYLDHSSLSESYFQMRGGIEDHGGKGARVEEEEEDLSMISDAS 60
Query: 58 SGPPHYHEEDDQIQSYGLNWYPSSSLYTKESVKKQKVKE----YGRIQQPSPLEFDDTAS 113
SGP HYHE+D Q Y +NWYPS+S YTKES KK+ + YG Q PSPL DDTAS
Sbjct: 61 SGPQHYHEDDGQ--HYCVNWYPSTSHYTKESEKKKNNNKKAKEYGNNQHPSPL--DDTAS 116
Query: 114 SPVLNCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQKHFSFF----GGKQASE 169
SPVLNC K K+ASFSGNGAVE+ALDF PCFS T+ K+K KFQKHFSFF GGKQASE
Sbjct: 117 SPVLNCPK--KKASFSGNGAVENALDFPPCFSGTKIKKKSKFQKHFSFFERSLGGKQASE 174
Query: 170 GPGGFDE 176
PGGFDE
Sbjct: 175 EPGGFDE 181
>Glyma06g05010.1
Length = 153
Score = 186 bits (473), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/156 (67%), Positives = 117/156 (75%), Gaps = 12/156 (7%)
Query: 1 MDMSSSQYNSASESGWTHYFDQPSLSEKHFQRSGIVE---YKGMXXXXXXXDLSMVSDAS 57
MD+SSSQYNSA ESGWT Y D SLSE +FQR G +E KG DLSM+SDAS
Sbjct: 1 MDISSSQYNSAGESGWTRYLDHSSLSESYFQRRGGIEDYGGKGATLEEEEEDLSMISDAS 60
Query: 58 SGPPHYHEEDDQIQSYGLNWYPSSSLYTKES--VKKQKVKEYGRIQQP-SPLEFDDTASS 114
SGPPHYHE+DD Q+Y +NWYPS+S YTKES K +KVKEYG QQP SPL DDTASS
Sbjct: 61 SGPPHYHEDDD--QNYCVNWYPSTSHYTKESENNKNKKVKEYGNNQQPSSPL--DDTASS 116
Query: 115 PVLNCHKANKQASFSGNGAVEDALDFSPCFSATRTK 150
PVLNC K K+ASFSGNGAVE+A+DF PCFS TR K
Sbjct: 117 PVLNCPK--KKASFSGNGAVENAVDFPPCFSGTRIK 150
>Glyma17g35230.1
Length = 183
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 122/184 (66%), Gaps = 19/184 (10%)
Query: 6 SQYNSASESGWTHYFDQPSLSEKHFQRSGIV----EYKGMXXXX-XXXDLSMVSDASSGP 60
SQY+SASESGWTHY DQ SL E ++QR G V E KG DLSMVSDASSGP
Sbjct: 5 SQYSSASESGWTHYLDQSSLPENYYQRRGGVVECDEGKGARMEEYSEEDLSMVSDASSGP 64
Query: 61 PHYHEEDDQIQSYGLNWYPSSSLYTKESVKK-QKVKEYGRIQQPSPLEFDDTASSPVLNC 119
P+Y E Y NWYP S TK+S KK +KVKEYGR QQPSPL DDTASSP NC
Sbjct: 65 PYYDNE-----CYCQNWYPCLSSTTKDSQKKNKKVKEYGRSQQPSPL--DDTASSPFFNC 117
Query: 120 HKAN--KQASFSGNGAVEDALDFSPCFSATRTKRKPKFQKHFSF----FGGKQASEGPGG 173
K + KQ SFSGNGAVE AL+FS C SATR KRK KFQKHF F GK SE GG
Sbjct: 118 AKESHKKQDSFSGNGAVESALNFSQCVSATRIKRKTKFQKHFGFLDRSLAGKLTSEEQGG 177
Query: 174 FDED 177
F+E+
Sbjct: 178 FNEE 181
>Glyma14g09930.1
Length = 154
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 94/143 (65%), Gaps = 14/143 (9%)
Query: 15 GWTHYFDQPSLSEKHFQ-RSGIVEYKG---MXXXXXXXDLSMVSDASSGPPHYHEEDDQI 70
GWTHY DQ SLSE ++Q R G+VE +G DLSMVSDASSGPPHY E
Sbjct: 19 GWTHYLDQSSLSENYYQRRGGVVECEGKGARMEEYSEEDLSMVSDASSGPPHYDNE---- 74
Query: 71 QSYGLNWYPSSSLYTKESVKK-QKVKEYGRIQQPSPLEFDDTASSPVLNCHKAN--KQAS 127
Y NWYP S KES KK +KVKEYGR QQPSPL DDTASSP N K + KQ S
Sbjct: 75 -CYCQNWYPCLSSKAKESQKKNKKVKEYGRSQQPSPL--DDTASSPFFNSSKESHKKQDS 131
Query: 128 FSGNGAVEDALDFSPCFSATRTK 150
FSGNGAVE ALDFS C SATR K
Sbjct: 132 FSGNGAVESALDFSQCVSATRIK 154
>Glyma18g15610.1
Length = 173
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 107/183 (58%), Gaps = 20/183 (10%)
Query: 1 MDMSSSQYNSASESGWTHYFDQPSLSEKHFQ-RSGIVEY--KGMXXXXXXXDLSMVSDAS 57
MD+SSSQYNSA ESGWTHY D SLSE +FQ R GI ++ KG DLSM+SDAS
Sbjct: 1 MDISSSQYNSAGESGWTHYLDHSSLSESYFQIRGGIEDHGGKGARVEEEEEDLSMISDAS 60
Query: 58 SGPPHYHEEDDQIQSYGLNWYPSSSLYTKESVKKQKVKEYGRIQQPSPLEFDDTASSPVL 117
GP HYHE+D Q ++ T K KV + L T S P+
Sbjct: 61 FGPQHYHEDDGQ------HYCNQKRRRTTTRRPKNKVT-------INILHLLMTLSVPLF 107
Query: 118 NCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQKHFSFF----GGKQASEGPGG 173
K+ASF GN AVE+ALDF PCF T+ K+K KFQKHFSFF GGKQASE P G
Sbjct: 108 LLVPRQKKASFLGNEAVENALDFPPCFLGTKIKKKSKFQKHFSFFERSLGGKQASEEPVG 167
Query: 174 FDE 176
FDE
Sbjct: 168 FDE 170
>Glyma06g35030.1
Length = 100
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Query: 1 MDMSSSQYNSASESGWTHYFDQPSLSEKHFQRSGIVE---YKGMXXXXXXXDLSMVSDAS 57
MD+SSSQYNSA ESGWTHY D SLSE +FQ G +E KG DLSM+SDAS
Sbjct: 1 MDISSSQYNSAGESGWTHYLDYSSLSESYFQMRGGIEDHGAKGARVEEEEEDLSMISDAS 60
Query: 58 SGPPHYHEEDDQIQSYGLNWYPSSSLYT 85
SGP HYHE+D Q Y +NWYPS+S YT
Sbjct: 61 SGPQHYHEDDG--QHYCVNWYPSTSHYT 86
>Glyma01g45310.1
Length = 174
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 1 MDMSSSQYNSASESGWT----HYFDQPSLSEKHFQRSGIVEYKGMXXXXXXXDLSMVSDA 56
M+ +SQ +S ESGWT H F + H + + DLSMVSDA
Sbjct: 1 MNALASQCSSGCESGWTLYLEHSFQLNHNASSHTTSQLFKDKQAKKEEAEEEDLSMVSDA 60
Query: 57 SSGPPHYHEEDDQIQSYGLNWYPSSSLYTKESVKKQKVKEYGRIQQPSPLEFDDTASSPV 116
SSGPPH H D Q + +++L K S K+QKVKE Q P DDTASSPV
Sbjct: 61 SSGPPHLHLPDAQDNGSFYSASKAANL-GKRSKKRQKVKE----NQHLPSFLDDTASSPV 115
Query: 117 LNCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQKHFSFFGGKQASEG 170
+ N + + + E LD+S FS T + + Q HF F Q+ G
Sbjct: 116 FDFSMTNVTVT-NQQTSTESMLDYSQGFSTTYYEERSSLQDHFGFLQQSQSENG 168
>Glyma20g27190.1
Length = 188
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 92/181 (50%), Gaps = 27/181 (14%)
Query: 3 MSSSQYNSASESGWTHYFDQPSLSEKHF--QRSGIV-----EYKGMXXXXXXXDLSMVSD 55
SS +S ESGWT Y + L++ R G E+K DLSMVSD
Sbjct: 4 FSSEICSSGCESGWTLYLENSFLNQNAAASHRGGTEGFYEEEHKDKRFKGEEEDLSMVSD 63
Query: 56 ASSGPPHYHEEDDQIQSYGLN--WYPSSS---LYTKESVKKQKVKE---YGRIQQPSPLE 107
ASSGPPH+ + D+ + +N +Y +S+ K KKQKVKE + + QQ P
Sbjct: 64 ASSGPPHFPDYDEAYFNEEVNGCFYSASNKAVKLAKSGAKKQKVKENQQHLQDQQHLPSF 123
Query: 108 FDDTASSPVLN-----CHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQ-KHFSF 161
DTASSPV++ ++AN+Q S + LD+S FSAT + +P FQ +HF F
Sbjct: 124 LHDTASSPVVDFSTNSVNEANQQTS------IGSMLDYSQGFSATYFEGRPSFQGEHFGF 177
Query: 162 F 162
Sbjct: 178 L 178
>Glyma10g40220.1
Length = 195
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 86/181 (47%), Gaps = 30/181 (16%)
Query: 3 MSSSQYNSASESGWTHYFDQPSLSEKHFQRSGIVEYK---GMXXXXXXXDLSMVSDASSG 59
SS +S ESGWT Y +Q L++K G E + DLSMVSDASSG
Sbjct: 4 FSSEICSSGCESGWTLYLEQSFLNQKAGGTEGSYEEEHKDKRFKDEEEEDLSMVSDASSG 63
Query: 60 PPHYHEEDDQIQSYGLNWYPSSSLY--TKESVKKQKV----------KEYGRIQQPSPLE 107
PPH+ + D+ +Y N + Y +K++V + K +++ QQ P
Sbjct: 64 PPHFPDYDE--ANY-FNEEVNGCFYSASKKAVMQAKSGTKKKKIKENQQHLEDQQHLPSF 120
Query: 108 FDDTASSPVL-----NCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQ-KHFSF 161
DTASSPV N + AN+Q S + LD+S FSAT + + FQ +HF F
Sbjct: 121 LYDTASSPVFDFSTNNVNVANQQTS------IGSMLDYSQGFSATYFEGRSSFQGEHFGF 174
Query: 162 F 162
Sbjct: 175 L 175
>Glyma10g40220.2
Length = 185
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 85/181 (46%), Gaps = 30/181 (16%)
Query: 3 MSSSQYNSASESGWTHYFDQPSLSEKHFQRSGIVEYK---GMXXXXXXXDLSMVSDASSG 59
SS +S ESGWT Y +Q L++K G E + DLSMVSDASSG
Sbjct: 4 FSSEICSSGCESGWTLYLEQSFLNQKAGGTEGSYEEEHKDKRFKDEEEEDLSMVSDASSG 63
Query: 60 PPHYHEEDDQIQSYGLNWYPSSSLY--TKESVKKQKV----------KEYGRIQQPSPLE 107
PPH+ + D ++ N + Y +K++V + K +++ QQ P
Sbjct: 64 PPHFPDYD---EANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKENQQHLEDQQHLPSF 120
Query: 108 FDDTASSPVL-----NCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQ-KHFSF 161
DTASSPV N + AN+Q S + LD+S FSAT + + FQ +HF F
Sbjct: 121 LYDTASSPVFDFSTNNVNVANQQTS------IGSMLDYSQGFSATYFEGRSSFQGEHFGF 174
Query: 162 F 162
Sbjct: 175 L 175