Miyakogusa Predicted Gene

Lj0g3v0196649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196649.1 tr|G7I715|G7I715_MEDTR
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
OS=Medicago trunc,63.86,1e-18, ,CUFF.12455.1
         (90 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g32030.1                                                       108   2e-24
Glyma14g14360.1                                                       101   2e-22

>Glyma17g32030.1 
          Length = 345

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 65/83 (78%), Gaps = 7/83 (8%)

Query: 3  SLKPSYSSDNLTLPVSDPPNDDDRERLLKGNDSIFRGSTRRERGGVYAAISYMSCAVLLV 62
          SLKPS SS+NL LPVSDPP   D +      D +F+GS   +RG  +AA+SYMSCAVLLV
Sbjct: 2  SLKPSNSSENLMLPVSDPPKSHDAD------DKLFKGSAMTKRGA-FAAVSYMSCAVLLV 54

Query: 63 MFNKAALSSYHFPSANVITLLQV 85
          MFNKAALSSY+FPSANVITLLQ+
Sbjct: 55 MFNKAALSSYNFPSANVITLLQM 77


>Glyma14g14360.1 
          Length = 345

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 7/83 (8%)

Query: 3  SLKPSYSSDNLTLPVSDPPNDDDRERLLKGNDSIFRGSTRRERGGVYAAISYMSCAVLLV 62
          SL+ S SS+NL LPVSDPP   D +      + +F+GS   +RG  +AA+SYMSCAVLLV
Sbjct: 2  SLRLSNSSENLMLPVSDPPKTQDAD------NKLFKGSAMTKRGA-FAAVSYMSCAVLLV 54

Query: 63 MFNKAALSSYHFPSANVITLLQV 85
          MFNKAALSSY+FPSANVITLLQ+
Sbjct: 55 MFNKAALSSYNFPSANVITLLQM 77