Miyakogusa Predicted Gene

Lj0g3v0196569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196569.1 Non Chatacterized Hit- tr|I3T4F4|I3T4F4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0.0000000003,
,NODE_65103_length_153_cov_21.986929.path1.1
         (35 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g33450.1                                                        66   1e-11
Glyma07g10100.1                                                        66   1e-11

>Glyma13g33450.1 
          Length = 309

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 33/35 (94%)

Query: 1  MAKARDRTEDFKDAVRQSARSLGYDEAKLASILAS 35
          M KARDRTEDFKDAVR +ARSLGYDEAKLAS++AS
Sbjct: 1  MGKARDRTEDFKDAVRHTARSLGYDEAKLASVMAS 35


>Glyma07g10100.1 
          Length = 309

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/35 (85%), Positives = 33/35 (94%)

Query: 1  MAKARDRTEDFKDAVRQSARSLGYDEAKLASILAS 35
          M KARDRTEDFKDAVR +ARSLGYDEAKLAS++AS
Sbjct: 1  MGKARDRTEDFKDAVRHTARSLGYDEAKLASVMAS 35