Miyakogusa Predicted Gene

Lj0g3v0196519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196519.1 Non Chatacterized Hit- tr|C5Y0T2|C5Y0T2_SORBI
Putative uncharacterized protein Sb04g031370
OS=Sorghu,34.97,9e-19,seg,NULL,CUFF.12438.1
         (308 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38280.1                                                       300   1e-81
Glyma18g48090.1                                                       287   1e-77
Glyma07g12890.1                                                       160   2e-39
Glyma03g24660.1                                                       149   5e-36

>Glyma09g38280.1 
          Length = 311

 Score =  300 bits (769), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 185/327 (56%), Positives = 205/327 (62%), Gaps = 35/327 (10%)

Query: 1   MRCKKHISDSSSTVGVCATCLRERLTFLIXXX------------XXXXXXLSRDCSRNSD 48
           M+CKKH SD SSTVGVCA+CLRERL  L                       S D SRNSD
Sbjct: 1   MKCKKHTSDLSSTVGVCASCLRERLISLAAAQAQAQAHHPQAQLTRVISRASDDYSRNSD 60

Query: 49  VNPPPPLIFPRSVSPYVSRRKSDYSAPGACHHSGDRRENRENLFYSTPQVGPSFYTG-AN 107
            NPPPPLIFPRSVSPYVSRRKSDY  P   HH     + RE LFYSTPQ+GP+F  G + 
Sbjct: 61  PNPPPPLIFPRSVSPYVSRRKSDY--PADWHH-----DRRERLFYSTPQLGPTFCAGDSE 113

Query: 108 AGEEARSIKKRLSKFWSFSNFFKHRSEKFRPDPSLEQPSTATASPSWFSNFFPXXXXXXX 167
              +A+S KKR +KF  F+  F+ RSEKF+ DPS EQ S A  SPSWFS FFP       
Sbjct: 114 YHADAKSFKKRFNKFRIFAKIFRTRSEKFQSDPSCEQASHA--SPSWFSAFFPTRRRNKD 171

Query: 168 XXXXXXXXXXXXXXX-YRPTDRGMSPVRIEDSPDECDQCDS-----SETSPWWRRTPSRL 221
                           YRP+DRGMSPV  ED  DECDQ  S     SE SPWWRRTP+  
Sbjct: 172 RSGTTKEYSSAAARRRYRPSDRGMSPVTTEDFGDECDQSPSGSGYVSEASPWWRRTPA-- 229

Query: 222 VVAPSARRSRVGRGMNVTGLDIAFCLSPLVRASPNRRWNNKGMPPEIXXXXXXXXXXTPK 281
            VAPSARRSR+G   + +G  +A CLSPLVRASPNRRWNNKG+PPE+            K
Sbjct: 230 -VAPSARRSRLGHTKSASGSGMALCLSPLVRASPNRRWNNKGLPPEM----AEVRAAAAK 284

Query: 282 PHLSAAASFCANRSRKLVDFGRVNQNR 308
           PHLSAAASFCANRSRKL DFGRVN NR
Sbjct: 285 PHLSAAASFCANRSRKLADFGRVNHNR 311


>Glyma18g48090.1 
          Length = 301

 Score =  287 bits (734), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 178/314 (56%), Positives = 205/314 (65%), Gaps = 22/314 (7%)

Query: 1   MRCKKHISDSSSTVGVCATCLRERLTFLIXXXXXXXXXLSRDCSRNSDVNPPPPLIFPRS 60
           M+CKKH SD SSTVGVCA+CLRERL  L+          S + SRNSD NPPPPLIFPRS
Sbjct: 1   MKCKKHTSDLSSTVGVCASCLRERLIALVAARVISRA--SDEYSRNSDPNPPPPLIFPRS 58

Query: 61  VSPYVSRRKSDYSAPGACHHSGDRRENRENLFYSTPQVGPSFYTGANAGE-EARSIKKRL 119
           VSPYVSRRK DY+A  A H      + R+ LFYSTPQ+GP+F  G +A   +A+S KKR 
Sbjct: 59  VSPYVSRRKPDYAA--AWHD-----DRRDRLFYSTPQLGPTFCAGDSAYHADAKSFKKRF 111

Query: 120 SKFWSFSNFFKHRSEKFRPDPSLEQPSTATASPSWFSNFFPXXXXXXXXXXXXXXXXXXX 179
           +KF  F+  F+ RSEKF+ DPS EQ S A  SPSWFS FFP                   
Sbjct: 112 NKFRIFAKIFRTRSEKFQSDPSCEQASYA--SPSWFSAFFPTRRRNKDRTGTTEEYSSSA 169

Query: 180 -XXXYRPTDRGMSPVRIEDSPDECDQCDS-----SETSPWWRRTPSRLVVAPSARRSRVG 233
               YRP+DRGMSPV  ED  DECDQ  S     SE SPWWRR+P+   VAPSARRSR+G
Sbjct: 170 PRRRYRPSDRGMSPVTTEDFGDECDQSPSGSGYVSEASPWWRRSPT---VAPSARRSRLG 226

Query: 234 RGMNVTGLDIAFCLSPLVRASPNRRWNNKGMPPEIXXXXXXXXXXTPKPHLSAAASFCAN 293
              + +G  +A  LSPLVRASPNRRWN+KG+PPE+            KPHLSAAASFCAN
Sbjct: 227 HTKSSSGSGMALWLSPLVRASPNRRWNHKGLPPEMAAAAEVRAAAA-KPHLSAAASFCAN 285

Query: 294 RSRKLVDFGRVNQN 307
           RSRKL DFGRVN +
Sbjct: 286 RSRKLADFGRVNNH 299


>Glyma07g12890.1 
          Length = 276

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/328 (37%), Positives = 157/328 (47%), Gaps = 72/328 (21%)

Query: 1   MRCKKHISDSSSTVGVCATCLRERLTFLIXXXXXXXXXLSRDCSRNSD------VNP--- 51
           MRCKKH+ D +ST+GVCA+CLRERL  L+          + D   N+       + P   
Sbjct: 1   MRCKKHLPDLTSTIGVCASCLRERLQPLLAAQAQSERSTNSDVDNNNHRRRKPKLKPEEN 60

Query: 52  PPPLIFPRSVSPYVSRRKSDYSAPGACHHSGDRRENRENLFYSTPQVGPSFYTGANAGEE 111
           P PL FPRSVSPYV+ RKSD           +RR  RE LFY TPQ+  +   G  A E 
Sbjct: 61  PLPLNFPRSVSPYVTHRKSDC----------ERR--RERLFYGTPQMNAAACDGGAASEN 108

Query: 112 ARSIKKRLSKFWSFSNFFKHRSEKFRPDPSLEQPSTATASPSWFSNFFPXXXXXXXXXXX 171
               ++   +FW  SN F+ RS K        + S +   PSWFS               
Sbjct: 109 ----RRHGGRFWILSNLFRARSNK-------TESSPSHPPPSWFSTIL------------ 145

Query: 172 XXXXXXXXXXXYRPTDRGMSPV-RIED--------SPDECDQCDSSETSPWWRRTPSRLV 222
                       R  DRG+SP+  +E+        + D  D   SSE SP  ++ P+   
Sbjct: 146 ----HARRHNKCRHADRGLSPLTEVENFTEFSADTAQDRSDSGISSEDSP-AKQNPTPET 200

Query: 223 VAPSARRSRVGRGMNVTGLDIAFCLSPLVRASPNRRW--NNKGMPPEIXXXXXXXXXXTP 280
               +R    G+G+      +AFCLSPLVRA PNR W  +NKG+ PE+            
Sbjct: 201 AHRRSRMGPAGKGL----ASMAFCLSPLVRAGPNRHWSYHNKGLAPELGVSGAH------ 250

Query: 281 KPHLSAAASFCANRSRKLVDFGRVNQNR 308
             H+S AASFCANRSRKL DFGR   NR
Sbjct: 251 --HISNAASFCANRSRKLADFGRGTHNR 276


>Glyma03g24660.1 
          Length = 289

 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 162/339 (47%), Gaps = 81/339 (23%)

Query: 1   MRCKKHISDSSSTVGVCATCLRERLTFLIXXXXXXXXXLSRDCSRNSDVN---------- 50
           MRCKKH+ D +ST+GVCA+CLRERL  L+           R  + NS+V+          
Sbjct: 1   MRCKKHLPDLTSTIGVCASCLRERLQPLLAAQAQAQAQSERSTT-NSNVDNNHRRRKPKP 59

Query: 51  ----PPPPLIFPRSVSPYVSRRKSDYSAPGACHHSGDRRENRENLFYSTPQVGPSFYTGA 106
                PPPL FPRSVSPYV+ RKSDY          DR  +R  LFYSTPQV  +   G 
Sbjct: 60  KPEENPPPLNFPRSVSPYVTHRKSDY----------DRLRDR--LFYSTPQVSGAACDGG 107

Query: 107 NAGEEARSIKKRLSKFWSFSNFFKHRSEKF------RPDPSLEQPSTATASPSWFSNFFP 160
            A E+    ++   +FW  SN F+ RS K       R DP+   P       SWFS    
Sbjct: 108 TALEK----RRHGGRFWILSNLFRARSNKTESSHEPREDPTGPHPPQ-----SWFSTILY 158

Query: 161 XXXXXXXXXXXXXXXXXXXXXXYRPTDRGMSPVRIED--------SPDECDQCDSSETSP 212
                                     DRG+SP   E+        + D  D  +SSETSP
Sbjct: 159 ARRHHDVRSPR--------------ADRGLSPSTAENFTQFSADSAQDRSDSGNSSETSP 204

Query: 213 WWRRTPSRLVVAPSARRSRVG-RGMNVTGLDIAFCLSPLVRASPNRRW--NNKGMPPEIX 269
             ++ P+ +      RRSR+G  G   T +  AFCL+PLVRA PNR W  +NKG+  E  
Sbjct: 205 -AKQNPTPVT---GHRRSRMGPTGKGFTSM--AFCLNPLVRAGPNRHWSHHNKGLAQEQG 258

Query: 270 XXXXXXXXXTPKPHLSAAASFCANRSRKLVDFGRVNQNR 308
                        H+S AASFCANRSRKL DFGR   NR
Sbjct: 259 GGGAH--------HISNAASFCANRSRKLADFGRGAHNR 289