Miyakogusa Predicted Gene
- Lj0g3v0196359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0196359.1 Non Chatacterized Hit- tr|I1MYB3|I1MYB3_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,38.67,1e-18,LRR,Leucine-rich repeat; LEURICHRPT,NULL;
LRR_1,Leucine-rich repeat; LRRNT_2,Leucine-rich
repeat-con,CUFF.12427.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g00610.2 64 2e-10
Glyma18g00610.1 64 2e-10
Glyma11g36700.1 61 1e-09
Glyma08g11350.1 60 3e-09
Glyma05g28350.1 56 4e-08
Glyma14g05240.1 53 4e-07
>Glyma18g00610.2
Length = 928
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 40 VAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXX 99
AIADD V+MSKL KAL P+PSGW+ +SFC W+GV C ++RVT I+
Sbjct: 27 TAIADDGVFMSKLAKALIPSPSGWT-GSSFCQWTGVKC-SANRVT-IIKIASQSLGGTLP 83
Query: 100 XXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLF 135
+G+LPSLANL+ L +F
Sbjct: 84 PDLNSLSQLTSLSLQNNKLSGALPSLANLSMLESVF 119
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 123 PSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLY 182
P+ ANLT+L LF L+ NNL G IP NNL G VPKF VK
Sbjct: 383 PAFANLTDLRNLF---LNDNNLGGSIPGSLTNLAQLEVLNVSNNNLSGDVPKFPTKVKFT 439
Query: 183 TAGNDLL--------------HSPCGGALSGSPS 202
TAGNDLL G A SGSPS
Sbjct: 440 TAGNDLLGRSDGGGGGSGTTPSKGSGDAPSGSPS 473
>Glyma18g00610.1
Length = 928
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 40 VAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXX 99
AIADD V+MSKL KAL P+PSGW+ +SFC W+GV C ++RVT I+
Sbjct: 27 TAIADDGVFMSKLAKALIPSPSGWT-GSSFCQWTGVKC-SANRVT-IIKIASQSLGGTLP 83
Query: 100 XXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLF 135
+G+LPSLANL+ L +F
Sbjct: 84 PDLNSLSQLTSLSLQNNKLSGALPSLANLSMLESVF 119
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 123 PSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLY 182
P+ ANLT+L LF L+ NNL G IP NNL G VPKF VK
Sbjct: 383 PAFANLTDLRNLF---LNDNNLGGSIPGSLTNLAQLEVLNVSNNNLSGDVPKFPTKVKFT 439
Query: 183 TAGNDLL--------------HSPCGGALSGSPS 202
TAGNDLL G A SGSPS
Sbjct: 440 TAGNDLLGRSDGGGGGSGTTPSKGSGDAPSGSPS 473
>Glyma11g36700.1
Length = 927
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 40 VAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXX 99
AIADD +MSKL KAL+PTPSGWS +SFC W+GV C + RVT+I
Sbjct: 27 TAIADDGEFMSKLAKALSPTPSGWS-GSSFCAWNGVKCS-AHRVTSI-NIASQSLGGMLP 83
Query: 100 XXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSRNN 143
+G+ PSLANL+ L +F LS NN
Sbjct: 84 PDLNSLSQLTSLSLQNNALSGAFPSLANLSMLESVF---LSSNN 124
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 42/93 (45%), Gaps = 16/93 (17%)
Query: 123 PSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLY 182
P+ ANLT+L LF L+ NNL G IP N L G VPKFS VK
Sbjct: 383 PAFANLTDLRNLF---LNDNNLGGSIPGSLTNLAQLEVLNVSNNKLSGDVPKFSSKVKFT 439
Query: 183 TAGNDLL-------------HSPCGGALSGSPS 202
TAGNDLL G A SGSPS
Sbjct: 440 TAGNDLLGRSDGGGGSGTTPSKGSGDAPSGSPS 472
>Glyma08g11350.1
Length = 894
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 27/101 (26%)
Query: 49 MSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXXXXXXXXXXX 108
MS LK+LTP PSGWS+ T FC W G+ CD SS VT+I
Sbjct: 1 MSNFLKSLTPPPSGWSETTPFCQWKGIQCDSSSHVTSI---------------------- 38
Query: 109 XXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSRNNLNGPIP 149
G+LPS +L +L+ L L+L N+L G +P
Sbjct: 39 ---SLASHSLTGTLPS--DLNSLSQLRTLSLQDNSLTGTLP 74
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 123 PSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLY 182
P+ ANLT+L LF L+ NNL G IP NNL G VPKF P VKL
Sbjct: 350 PAFANLTDLRTLF---LNGNNLIGSIPDSLITLPQLQTLDVSDNNLSGLVPKFPPKVKLV 406
Query: 183 TAGNDLLHSP 192
TAGN LL P
Sbjct: 407 TAGNALLGKP 416
>Glyma05g28350.1
Length = 870
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 123 PSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLY 182
P+ ANLT+L LF L+ NNL G IP NNL G VPKF P VKL
Sbjct: 350 PAFANLTDLRSLF---LNGNNLTGSIPESLTTLSQLQTLDVSDNNLSGLVPKFPPKVKLV 406
Query: 183 TAGNDLLH---SPCGG 195
TAGN LL SP GG
Sbjct: 407 TAGNALLGKALSPGGG 422
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 49 MSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXXXXXXXXXXX 108
MS L +LTP PSGWSQ T FC W G+ CD S VT+I
Sbjct: 1 MSNFLISLTPPPSGWSQTTPFCQWKGIQCDSSRHVTSI-SLASQSLTGTLPSDLNSLSQL 59
Query: 109 XXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSRNN 143
+G+LPSL+NL+ L + L+RNN
Sbjct: 60 RTLSLQDNSLSGTLPSLSNLSFLQTAY---LNRNN 91
>Glyma14g05240.1
Length = 973
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 61 SGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNG 120
S W+ S C W G+VCD S VTAI F+G
Sbjct: 24 SSWTSGVSPCRWKGIVCDESISVTAINVTNLGLQGTLHTLNFSSFPKLLTLDISHNSFSG 83
Query: 121 SLPSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPK 174
++P + NL+ + +L +S NN +GPIP YN L G +P+
Sbjct: 84 TIPQ--QIANLSSVSQLIMSANNFSGPIPISMMKLASLSILNLEYNKLSGSIPE 135