Miyakogusa Predicted Gene

Lj0g3v0196219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196219.1 Non Chatacterized Hit- tr|O23545|O23545_ARATH
Putative uncharacterized protein AT4g17010
OS=Arabidop,53.97,0.000000005,coiled-coil,NULL; seg,NULL,CUFF.12413.1
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g09200.1                                                       244   3e-65
Glyma16g13540.1                                                       134   6e-32
Glyma16g13510.1                                                        49   4e-06

>Glyma09g09200.1 
          Length = 195

 Score =  244 bits (624), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 129/201 (64%), Positives = 154/201 (76%), Gaps = 11/201 (5%)

Query: 1   MNKFVEFGRKALFYVRVLSGYEERKIRSFXXXXXXXXXXXXXXXXXINKVPEQVMLSEVR 60
           M K ++FG+KALFYVRVLSGYEER+IRS+                 INKVPEQV+LSEVR
Sbjct: 1   MKKLLDFGKKALFYVRVLSGYEERRIRSYRLQLEQRVQQAQARRAAINKVPEQVILSEVR 60

Query: 61  RMVEEMQALNKKLEETEVAIEEYFKPLDKEAEIIMQMQLQREEKTSEMMMSALEQQALLK 120
           RMVEEMQALNKKLEETE A+E+YFKPLDKEAE+IM+MQLQ EEKTSEMMM ALE+QA L+
Sbjct: 61  RMVEEMQALNKKLEETEAAVEDYFKPLDKEAELIMKMQLQGEEKTSEMMMKALEKQASLQ 120

Query: 121 NDEAGKTA-----DNASTNLKESEIMMKMPIGEEENTLKEMMTAMQQQILLEKANAENTD 175
             EA K A     DN+ TNL ESE+M      EEE TLKEM+ A+QQ++LLEKA+AE++D
Sbjct: 121 QVEAEKNASKHQVDNSETNLNESEMM------EEEKTLKEMLKALQQEVLLEKADAESSD 174

Query: 176 GVHQSEKSNINPVPASTTTSK 196
            VHQ++KS+I+   ASTTT K
Sbjct: 175 NVHQADKSHIDLTSASTTTPK 195


>Glyma16g13540.1 
          Length = 134

 Score =  134 bits (337), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/135 (58%), Positives = 100/135 (74%), Gaps = 1/135 (0%)

Query: 62  MVEEMQALNKKLEETEVAIEEYFKPLDKEAEIIMQMQLQREEKTSEMMMSALEQQALLKN 121
           MV+EM+ALNKKLEETE AIE+YFKPLDKEAEIIM+MQ+Q EE+TSE+MM ALE+QA L+ 
Sbjct: 1   MVDEMKALNKKLEETETAIEDYFKPLDKEAEIIMKMQIQGEERTSEIMMQALEKQATLQQ 60

Query: 122 DEAGKTADNASTNLKESEIMMKMPIGEEENTLKEMMTAMQQQILLEKANAENTDGVHQSE 181
            EA K A     N  E+ +     + EE+ TL EM+ A+QQ++LLEKA+ E+    HQ++
Sbjct: 61  AEAEKNASKHQVNHAETNMNESEMMEEEK-TLTEMLKALQQEVLLEKADTESDVNAHQAD 119

Query: 182 KSNINPVPASTTTSK 196
            S IN   ASTTTSK
Sbjct: 120 NSPINLSSASTTTSK 134


>Glyma16g13510.1 
          Length = 36

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/29 (79%), Positives = 27/29 (93%)

Query: 1  MNKFVEFGRKALFYVRVLSGYEERKIRSF 29
          M K ++FGRKALFYVRVLSGYEER+IRS+
Sbjct: 1  MKKLLDFGRKALFYVRVLSGYEERRIRSY 29