Miyakogusa Predicted Gene

Lj0g3v0195659.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0195659.2 Non Chatacterized Hit- tr|G7LFF0|G7LFF0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,76.47,0.00000000000008,seg,NULL,CUFF.12371.2
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g02790.1                                                        71   4e-13

>Glyma19g02790.1 
          Length = 356

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/43 (83%), Positives = 39/43 (90%), Gaps = 1/43 (2%)

Query: 97  LEINERPLKRPLRDFANLSI-SDSAQKVKFNNKKVFMQHVETI 138
           LEINERPLKRPL DF NLSI S+SAQKV+F NKKVF+QHVETI
Sbjct: 33  LEINERPLKRPLLDFGNLSISSNSAQKVEFYNKKVFVQHVETI 75



 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 25  SQSPLDAFWLEINERPFNRPLQHFANLSITDSAPNGPWFCHGNVGLEINERPLKRP---- 80
           SQSPLDAFWLEINERP  RPL  F NLSI+ ++     F +  V ++  E          
Sbjct: 24  SQSPLDAFWLEINERPLKRPLLDFGNLSISSNSAQKVEFYNKKVFVQHVETISSSEVTFD 83

Query: 81  -LQDFANLSISDSALNGLEINER 102
            +Q F +L  S ++ +  +I ER
Sbjct: 84  IVQSFVDLGSSGASDSKSKIKER 106