Miyakogusa Predicted Gene
- Lj0g3v0195339.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0195339.2 Non Chatacterized Hit- tr|B9RMP7|B9RMP7_RICCO
Two-component sensor histidine kinase bacteria,
putati,31.3,5e-19,seg,NULL; no
description,Homeodomain-like,CUFF.12360.2
(229 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g27670.1 176 1e-44
Glyma08g10650.1 175 4e-44
Glyma18g01430.1 159 3e-39
Glyma11g37480.1 131 6e-31
Glyma18g01430.2 74 1e-13
>Glyma05g27670.1
Length = 584
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 129/221 (58%), Gaps = 26/221 (11%)
Query: 34 SSKGSLTSFDCAIPTQYSWTEVPRMQLKE-QKSIVQLEDSFNQLPPLLGKXXXXXXXXXX 92
SS+ + FDC IPTQYSW+E P+ LKE QK++VQLEDS +QLP L G
Sbjct: 365 SSEANHAVFDCTIPTQYSWSEFPKGPLKEEQKTLVQLEDSLSQLP-LHGNGTQHHIHVDQ 423
Query: 93 XXXXXX-------TEEEVPACIETNPLFSDYNSSYTS----------------GSLMMSD 129
TEEEV A +ET PL++ Y S Y S SLM++D
Sbjct: 424 SQSIASINSNPSITEEEVAAKLETKPLYAGYESDYVSPVSSIGSAVEVFPSQSKSLMVND 483
Query: 130 QPLQPTSAANLGLKTLGSNLSSISHLEFFQRNLLLGADTPSASSEEDLYSYRIQGECYDM 189
Q +PT +NL LK G N IS L+F+QRNLLLG + SA EEDL + +Q ECY+M
Sbjct: 484 QSSEPTFTSNLSLKAQGFNRDCISDLDFYQRNLLLGGEVASAPLEEDLNFFLLQTECYNM 543
Query: 190 NFCLQSIEMPEFYDPGLITEFPPH-YDSTDYSVMDQGLLIA 229
NF LQ+I+M E+YDP LI E P H YDS DYS +DQ L IA
Sbjct: 544 NFGLQNIDMSEYYDPRLIAEVPSHFYDSADYSSVDQSLFIA 584
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 1 MNVPWLTREKIASHLQKYRLSLSRLQKDDEQNSSSKG 37
MNVPWLTRE +ASHLQKYRL LSRLQK+++Q SSS G
Sbjct: 236 MNVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSSG 272
>Glyma08g10650.1
Length = 543
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 129/219 (58%), Gaps = 24/219 (10%)
Query: 34 SSKGSLTSFDCAIPTQYSWTEVPRMQLKE-QKSIVQLEDSFNQLPPLLG-----KXXXXX 87
SS+ + FDC IPT+YSW+E P+ LKE QK+ VQLEDS QLP L G +
Sbjct: 326 SSEANHAVFDCTIPTEYSWSEFPKGPLKEEQKTPVQLEDSLCQLP-LHGTQHHIQIDQSQ 384
Query: 88 XXXXXXXXXXXTEEEVPACIETNPLFSDYNSSYT----------------SGSLMMSDQP 131
TEEEV A +ET PL++ Y S Y S SLM+SDQ
Sbjct: 385 SIASINSNPSITEEEVAAKLETKPLYAGYESDYVNPVSSIGSAVEAFRSQSKSLMVSDQS 444
Query: 132 LQPTSAANLGLKTLGSNLSSISHLEFFQRNLLLGADTPSASSEEDLYSYRIQGECYDMNF 191
+PT +NL LKT G NL IS L+F+QRNLLLG + SA +EDL + +Q ECY+MNF
Sbjct: 445 SEPTFTSNLSLKTQGFNLDCISDLDFYQRNLLLGGEVASAPLDEDLNFFLLQSECYNMNF 504
Query: 192 CLQSIEMPEFYDPGLITEFPPH-YDSTDYSVMDQGLLIA 229
LQ+I+M E+YDP L E P H YDS DYS +DQ L IA
Sbjct: 505 GLQNIDMSEYYDPRLTAEVPSHFYDSADYSSVDQSLFIA 543
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 1 MNVPWLTREKIASHLQKYRLSLSRLQKDDEQNSSSKG 37
MNVPWLTRE +ASHLQKYRL LSRLQK+++Q SSS G
Sbjct: 197 MNVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSSG 233
>Glyma18g01430.1
Length = 529
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 122/215 (56%), Gaps = 56/215 (26%)
Query: 35 SKGSLTSFDCAIPTQYSWTEVPRMQLKEQ-KSIVQLEDSFNQLPPLLGKXXXXXXXXXXX 93
S+G+ FDC++PT YSWTEVP MQLKE+ KS+V LEDSFNQLP
Sbjct: 351 SEGNHAVFDCSMPTPYSWTEVPHMQLKEEHKSLVYLEDSFNQLP---------------- 394
Query: 94 XXXXXTEEEVPACIETNPLFSDYNSSYTS----------------GSLMMSDQPLQPTSA 137
DYN+ Y S GSL+M+ Q + S
Sbjct: 395 -------------------LHDYNNDYASSVSSIGNAVATFPIQPGSLIMNGQSSERIST 435
Query: 138 ANLGLKTLG-SNLSSISHLEFFQRNLLLGADTPSASSEEDLYSYRIQGECY-DMNFCLQS 195
GLKT +NLSSIS E +QRNLL G + SAS +EDL+ Y ++GECY +MNF LQ+
Sbjct: 436 TTSGLKTQEYNNLSSISDQEIYQRNLL-GCEAASASLDEDLHFYWLEGECYNNMNFGLQN 494
Query: 196 IEMPEFYDPGLITEFPPH-YDSTDYSVMDQGLLIA 229
I M E+YDPGLI+E P H YDS DYSVMDQGL IA
Sbjct: 495 IGMSEYYDPGLISEAPIHLYDSADYSVMDQGLFIA 529
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 1 MNVPWLTREKIASHLQKYRLSLSRLQKDDEQNSSSKG 37
MNVPWLTRE +ASHLQKYRL LSR+QK+++Q SSS G
Sbjct: 220 MNVPWLTRENVASHLQKYRLYLSRIQKENDQRSSSSG 256
>Glyma11g37480.1
Length = 497
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 111/195 (56%), Gaps = 36/195 (18%)
Query: 42 FDCAIPTQYSWTEVPRMQLKEQ-KSIVQLEDSFNQLPPLLGKXXXXXXXXXXXXXXXXTE 100
FDC++PT Y+WTEVP MQLKE+ KSIV LEDSFNQL PL GK +
Sbjct: 332 FDCSMPTPYTWTEVPHMQLKEEHKSIVHLEDSFNQL-PLHGK---------QQQHIQVDQ 381
Query: 101 EEVPACIETNPLFS----DYNSSYTSGSLMMSDQPLQPTSAANLGLKTLGSNLSSISHLE 156
+ A I + PL + DY +S +S + P+QP GS + +++
Sbjct: 382 SQSVASISSAPLITEEENDYANSVSSIGNAVGTFPIQP-----------GSLIMNVA--- 427
Query: 157 FFQRNLLLGADTPSASSEEDLYSYRIQGECY-DMNFCLQSIEMPEFYDPGLITEFPPH-Y 214
L+ T + EDL+ Y +QGECY +MNF LQ+I M E+YDPGLI+E P H Y
Sbjct: 428 -----FLIWKFTKATFFWEDLHFYWLQGECYNNMNFSLQNIGMSEYYDPGLISEAPTHLY 482
Query: 215 DSTDYSVMDQGLLIA 229
DS DYSV+DQGL IA
Sbjct: 483 DSADYSVIDQGLFIA 497
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 1 MNVPWLTREKIASHLQKYRLSLSRLQKDDEQNSSSKG 37
MNVPWLTRE +ASHLQKYRL LSR+QK+++Q SSS G
Sbjct: 218 MNVPWLTRENVASHLQKYRLYLSRIQKENDQRSSSSG 254
>Glyma18g01430.2
Length = 226
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 35 SKGSLTSFDCAIPTQYSWTEVPRMQLKEQ-KSIVQLEDSFNQLPPLLGKXXXXXXXXXXX 93
S+G+ FDC++PT YSWTEVP MQLKE+ KS+V LEDSFNQL PL GK
Sbjct: 132 SEGNHAVFDCSMPTPYSWTEVPHMQLKEEHKSLVYLEDSFNQL-PLHGKQQQHIHVDQSQ 190
Query: 94 XXX------XXTEEEVPACIETNP 111
TEEE ACIE P
Sbjct: 191 SVASISSAPSITEEEAAACIEPKP 214
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 1 MNVPWLTREKIASHLQKYRLSLSRLQKDDEQNSSSKG 37
MNVPWLTRE +ASHLQKYRL LSR+QK+++Q SSS G
Sbjct: 1 MNVPWLTRENVASHLQKYRLYLSRIQKENDQRSSSSG 37