Miyakogusa Predicted Gene

Lj0g3v0194299.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0194299.1 Non Chatacterized Hit- tr|I1MZ82|I1MZ82_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.9,1e-18,seg,NULL,CUFF.12282.1
         (143 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03740.1                                                        81   3e-16
Glyma11g34650.1                                                        71   4e-13

>Glyma18g03740.1 
          Length = 158

 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/116 (46%), Positives = 65/116 (56%), Gaps = 14/116 (12%)

Query: 17  NFDHLFGPKDXXXXXXXXXXXXXXXXXPPPPVGRRESRTQVVGSRNFSAPGTHSSNTNKG 76
           NFDHLFGPKD                 PP  VG R+S  Q  G +N+ APG +S    KG
Sbjct: 19  NFDHLFGPKDPSTTSSSSTSIFGSIFPPPSTVGGRDSTKQDTGCKNYGAPGNYSY---KG 75

Query: 77  ESNSRIICKN--------YQNEMVEAQPSYFSSSIYYGGQENYSPRT-TQPHQHVV 123
           ES++  +  N        +QNE VE  PSY+SSSI+YGGQENYSPRT T    H+V
Sbjct: 76  ESSASGVSNNNNTTSTNYHQNETVE--PSYYSSSIHYGGQENYSPRTRTTESHHIV 129


>Glyma11g34650.1 
          Length = 163

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 74/135 (54%), Gaps = 19/135 (14%)

Query: 1   MDTKKKQ---AGDSSSSTMNFDHLFGPKDXXXXXXXXXXXXXXXXXPPPP-VGRRESRTQ 56
           M+  KK+    G SSSS  NFDHLFGPKD                 PPP  VG R+S  Q
Sbjct: 1   MENNKKKVVGGGPSSSSFTNFDHLFGPKDPSTTSSSSTSIFGSIFPPPPSTVGGRDSTKQ 60

Query: 57  VVGSRNFSAPGTHSSNTNKGESNSRIICKN----------YQNEMVEAQPSYFSSSIYYG 106
            +G +N+ APG +S    KGES++  +  N          +QNE VE  PSY+SSSIYYG
Sbjct: 61  DMGCKNYGAPGNYSY---KGESSASGVVSNSKNTTSTNYHHQNETVE--PSYYSSSIYYG 115

Query: 107 GQENYSPRTTQPHQH 121
           GQENYSPRT     H
Sbjct: 116 GQENYSPRTRTTESH 130