Miyakogusa Predicted Gene
- Lj0g3v0194229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0194229.1 tr|Q6ZGL7|Q6ZGL7_ORYSJ Glutamate receptor
OS=Oryza sativa subsp. japonica GN=OJ1442_E05.29 PE=3
SV=1,59.49,4e-19,GLUTAMATE RECEPTOR 3 PLANT,NULL; IONOTROPIC GLUTAMATE
RECEPTOR,NULL,CUFF.12281.1
(90 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g00350.1 149 5e-37
Glyma02g48130.1 132 1e-31
Glyma09g32980.1 95 2e-20
Glyma04g01760.1 90 7e-19
Glyma06g01860.1 88 2e-18
Glyma16g21470.1 88 2e-18
Glyma09g32990.1 86 6e-18
Glyma12g10650.1 84 4e-17
Glyma06g46130.1 84 5e-17
Glyma01g36210.1 83 6e-17
Glyma09g33010.1 80 4e-16
Glyma13g38450.1 78 2e-15
Glyma13g38460.1 76 1e-14
Glyma12g32030.1 75 1e-14
Glyma16g21450.1 71 2e-13
Glyma12g32020.1 69 2e-12
Glyma11g09230.1 66 7e-12
Glyma13g30620.1 52 2e-07
>Glyma14g00350.1
Length = 860
Score = 149 bits (377), Expect = 5e-37, Method: Composition-based stats.
Identities = 73/99 (73%), Positives = 83/99 (83%), Gaps = 9/99 (9%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDEQLQLHSFRGLFLICGITCFLALLIY 60
MSTAIL+LSENGEL+RI EKWLSEKACGF + EDEQL+L+SFRGLFLICGITCFLALLIY
Sbjct: 756 MSTAILTLSENGELQRIHEKWLSEKACGFHSTEDEQLKLNSFRGLFLICGITCFLALLIY 815
Query: 61 FFSIVRQFSQNTPHK--------DRS-RIQTFLNFVDEK 90
F S+VRQF++ +P K RS RIQTFL+FVDEK
Sbjct: 816 FLSMVRQFNKKSPQKVGPSNRCSSRSARIQTFLHFVDEK 854
>Glyma02g48130.1
Length = 701
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 80/100 (80%), Gaps = 10/100 (10%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDEQLQLHSFRGLFLICGITCFLALLIY 60
M+TAIL+LSEN EL+RI+EKWLSEKACGF + E+EQLQL+SFRGLFLIC ITCFLALL Y
Sbjct: 595 MTTAILTLSENAELQRIQEKWLSEKACGFHSTEEEQLQLNSFRGLFLICEITCFLALLTY 654
Query: 61 FF-SIVRQFSQNTPHK---------DRSRIQTFLNFVDEK 90
FF S+VRQFS+ +P K + IQTFL+FVDEK
Sbjct: 655 FFLSMVRQFSKKSPQKVGPSNRCSSRSAHIQTFLHFVDEK 694
>Glyma09g32980.1
Length = 940
Score = 94.7 bits (234), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/100 (49%), Positives = 67/100 (67%), Gaps = 10/100 (10%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNN--EDEQLQLHSFRGLFLICGITCFLALL 58
+STAIL L+ENG+L+RI +KWL AC + E ++L L SF GL+L+CG+ C LALL
Sbjct: 793 LSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLNLRSFWGLYLVCGLACVLALL 852
Query: 59 IYFFSIVRQFSQNTPHK--------DRSRIQTFLNFVDEK 90
IYF +RQ+S++ P + SR++TFL FVDEK
Sbjct: 853 IYFIQTMRQYSKHGPEELESSGHGSGSSRLRTFLTFVDEK 892
>Glyma04g01760.1
Length = 887
Score = 89.7 bits (221), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 9/99 (9%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNE--DEQLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSE G+L+RI +KW++ +C N E ++LQL SF GLFLICGI CF+AL+
Sbjct: 761 MSTAILQLSETGDLQRIHDKWMTRSSCSLENAEIDSDRLQLKSFWGLFLICGIACFIALV 820
Query: 59 IYFFSIVRQFSQ-------NTPHKDRSRIQTFLNFVDEK 90
++F ++ Q Q ++ R Q FL +DEK
Sbjct: 821 LHFMQLMFQLWQSPPSEPASSASSISGRFQRFLTLIDEK 859
>Glyma06g01860.1
Length = 929
Score = 88.2 bits (217), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 9/99 (9%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNE--DEQLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSE G+L+RI +KW++ +C N E ++LQL SF GLFLICGI CF+AL+
Sbjct: 790 MSTAILQLSETGDLQRIHDKWMTRSSCSLENAEIDSDRLQLKSFWGLFLICGIACFIALV 849
Query: 59 IYFFSIVRQFSQ-------NTPHKDRSRIQTFLNFVDEK 90
++F ++ Q Q ++ R FL +DEK
Sbjct: 850 LHFLQLMFQLRQSPPSEPASSASSISGRFHRFLTLIDEK 888
>Glyma16g21470.1
Length = 878
Score = 88.2 bits (217), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 10/100 (10%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNN--EDEQLQLHSFRGLFLICGITCFLALL 58
+STAIL L+ENG+L+RI +KWL AC + E ++L L SF GL+L+CG+ C LALL
Sbjct: 762 LSTAILELAENGDLQRIHDKWLLSSACLSQGAKLEVDRLNLRSFWGLYLVCGLACVLALL 821
Query: 59 IYFFSIVRQFSQNTPHKDRSR--------IQTFLNFVDEK 90
IY +RQ+S++ P + S ++TFL F+DEK
Sbjct: 822 IYCIQTMRQYSKHRPEELESSGHGSGSSCLRTFLTFIDEK 861
>Glyma09g32990.1
Length = 882
Score = 86.3 bits (212), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 8/98 (8%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNED--EQLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSENG+L+RI +KWL+ AC + ++L+L SF GLFL+ GI CF+ALL
Sbjct: 765 MSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELKSFWGLFLLSGIACFIALL 824
Query: 59 IYFFSIVRQFSQNTPHKD------RSRIQTFLNFVDEK 90
Y + +FS+++ + +R+++FL+FV+E+
Sbjct: 825 CYVIRMAYRFSRDSNSNNIECSSLSARLRSFLSFVNER 862
>Glyma12g10650.1
Length = 924
Score = 83.6 bits (205), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDEQLQLHSFRGLFLICGITCFLALLIY 60
+STAIL LSE+G+L+RI +KWL++K C + +L L SF GLFLICGI C +AL+I+
Sbjct: 800 LSTAILQLSESGDLQRIHDKWLNKKECATVDANSNKLALTSFWGLFLICGIACVIALIIF 859
Query: 61 FFSIVRQFSQNTPHKDRS 78
F I Q+++ +P +++
Sbjct: 860 FARIFCQYNKFSPEPEKT 877
>Glyma06g46130.1
Length = 931
Score = 83.6 bits (205), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDEQLQLHSFRGLFLICGITCFLALLIY 60
+STAIL LSE+G+L++I +KWL++K C + + +L L SF GLFLICGI C +AL I+
Sbjct: 806 LSTAILQLSESGDLQKIHDKWLNKKECSTVDTDSNKLALTSFWGLFLICGIACVIALTIF 865
Query: 61 FFSIVRQFSQNTPHKDR 77
F I Q+++ +P D+
Sbjct: 866 FARIFCQYNKFSPEPDK 882
>Glyma01g36210.1
Length = 938
Score = 83.2 bits (204), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 16/105 (15%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNN--EDEQLQLHSFRGLFLICGITCFLALL 58
+STAIL + ++G+L+RI +KWL AC + E E+LQL SF GL++ICG+ C LAL
Sbjct: 791 LSTAILQMIDSGDLQRIHDKWLLSSACLSQGAKFEVERLQLKSFWGLYMICGLACLLALF 850
Query: 59 IYFFSIVRQF-------------SQNTPHKDRSRIQTFLNFVDEK 90
IY I RQ+ QN K S ++TFL+FVDEK
Sbjct: 851 IYLIQIWRQYHKHYVSEELHSTDGQNIGSKS-SHLKTFLSFVDEK 894
>Glyma09g33010.1
Length = 888
Score = 80.1 bits (196), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 10/97 (10%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNED--EQLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSENG+L+RI +KWL+ AC + ++L+L SF GLFL+ GI CF+ALL
Sbjct: 782 MSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELESFWGLFLLSGIACFIALL 841
Query: 59 IYFFSIVRQFSQNTPHKD-------RSRIQTFLNFVD 88
Y + +FS++ P+ + +R+++F FV+
Sbjct: 842 CYVIRMAYRFSRH-PNSNPEGCSSYYTRLRSFFTFVN 877
>Glyma13g38450.1
Length = 931
Score = 77.8 bits (190), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDE--QLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSENG+L++I +KWL + C +N+ + +L L SF GLFLICGI C LAL+
Sbjct: 791 MSTAILQLSENGDLQKIHDKWLLKHDCSAPDNDADLNKLSLSSFWGLFLICGIACLLALV 850
Query: 59 IYFFSIVRQFSQNTPHKDRSRIQTFLN 85
+ ++ Q+++ +P ++ +T N
Sbjct: 851 AFSIRVLCQYTKFSPEPEQDDEETSPN 877
>Glyma13g38460.1
Length = 909
Score = 75.9 bits (185), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 23/110 (20%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACG---FRNNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL LSENG+LR+I EKW + C N++ +QL L SF GL+L CGI +AL
Sbjct: 785 MSTAILKLSENGDLRKIHEKWFCKMRCPEDRTSNSKPDQLHLISFWGLYLSCGIVSLVAL 844
Query: 58 LIYFFSIVRQFSQNTPHKDRSR-----------------IQTFLNFVDEK 90
++ ++RQ+++ K R + + F NF+DEK
Sbjct: 845 ALFLLRMIRQYAR---FKQRQKNVASSSPEPSGIHCSQVVVNFFNFIDEK 891
>Glyma12g32030.1
Length = 936
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNEDE--QLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSENG+L++I +KWL ++ C +++ + +L L SF GLFLI GI C LAL+
Sbjct: 796 MSTAILQLSENGDLQKIHDKWLLKRDCSAPDSDADLNKLSLGSFWGLFLISGIACLLALV 855
Query: 59 IYFFSIVRQFSQNTPHKDR 77
+F ++ Q+++ +P ++
Sbjct: 856 TFFIRVLCQYTKFSPEPEQ 874
>Glyma16g21450.1
Length = 230
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNNED--EQLQLHSFRGLFLICGITCFLALL 58
MSTAIL LSENG+L+RI +KWL+ AC + ++L+L +F GLFL+ GI CF+ALL
Sbjct: 155 MSTAILKLSENGDLQRIHDKWLTRSACSSEGAKQGIDRLELENFWGLFLLSGIACFIALL 214
Query: 59 IYFFSIVRQF 68
Y + F
Sbjct: 215 CYVIRMAYHF 224
>Glyma12g32020.1
Length = 909
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 17/107 (15%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACG---FRNNEDEQLQLHSFRGLFLICGITCFLAL 57
MSTAIL LSENG+LR+I EKW + C N++ +QL L SF GL+L CGI +AL
Sbjct: 785 MSTAILKLSENGDLRKIHEKWFCKMGCAEDRTSNSKPDQLHLISFWGLYLSCGIVLLVAL 844
Query: 58 LIYFFSIVRQFSQ-NTPHKDRSRIQT-------------FLNFVDEK 90
++ ++RQ+++ KD + T F NF+DEK
Sbjct: 845 ALFLLLMIRQYARFKQRQKDVASSSTEPSGIHCSQVVVNFFNFIDEK 891
>Glyma11g09230.1
Length = 938
Score = 66.2 bits (160), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 14/104 (13%)
Query: 1 MSTAILSLSENGELRRIREKWLSEKACGFRNN--EDEQLQLHSFRGLFLICGITCFLALL 58
+STAIL + +NG+L+RI +KWL AC + E E+LQL SF GL++ICG+ C LALL
Sbjct: 791 LSTAILQMIDNGDLQRIHDKWLLSSACLSQGAKLEVERLQLKSFWGLYVICGLACLLALL 850
Query: 59 IYFFSIVRQFSQNTPHKD------------RSRIQTFLNFVDEK 90
+Y I RQ+ ++ ++ SR++TFL+F DEK
Sbjct: 851 VYLIQIWRQYHKHYVSEELDSSDGQSLGSKSSRLKTFLSFADEK 894
>Glyma13g30620.1
Length = 837
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 2 STAILSLSENGELRRIREKWLS-EKAC--GFRNNEDEQLQLHSFRGLFLICG---ITCF- 54
S A L+L+ENG L+ + EKWL+ K C G + E E L LH+F GL++IC CF
Sbjct: 676 SEAFLTLAENGALKTLEEKWLTPSKECSNGSTSPETESLTLHNFWGLYIICAAISTICFV 735
Query: 55 LALLIYFFSIVRQFSQNTPHKDRS 78
+ALL + + H+D +
Sbjct: 736 MALLKNHLNKHNHIEEEDQHQDSA 759