Miyakogusa Predicted Gene

Lj0g3v0194129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0194129.1 tr|B9NC71|B9NC71_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_679475 PE=4
SV=1,72.88,0.000000000000002,seg,NULL,CUFF.12273.1
         (450 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g31400.1                                                       401   e-112
Glyma13g45020.1                                                       387   e-107

>Glyma12g31400.1 
          Length = 515

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/284 (72%), Positives = 237/284 (83%), Gaps = 18/284 (6%)

Query: 31  KTRAIGLFKAISRILEDFDAYARTNTTPKWQDILGQYSMLNLELFNIVDEIKKVSKAFLV 90
           KTRAI LFKAISRILEDF+AY RTN+TPKWQDILGQYSM+NLELFNIVD+IKKVSKAF+V
Sbjct: 24  KTRAISLFKAISRILEDFEAYGRTNSTPKWQDILGQYSMVNLELFNIVDDIKKVSKAFVV 83

Query: 91  YPKNVNAQNATILPVMLSSKLLPEIEIDDASKRDQLLHSMQNLPIPTQIDKLKARIDMIA 150
           +PKNVNA+NATILPVMLSSKLLPE+E DD +KRDQLL  MQNLPI  Q++KLKAR+D+I+
Sbjct: 84  HPKNVNAENATILPVMLSSKLLPEMETDDTAKRDQLLLGMQNLPIGMQMEKLKARLDLIS 143

Query: 151 AACEGAEKVLADTRKAYCFGTRQGPSSIAPTTLDKGQAAKIQEKENLLRSAVNVGEGLRI 210
           AACEGAEKVLADTRKAYCFGTRQGP +IAP TLDKGQAAKIQE+ENLLRSAVN G+GLRI
Sbjct: 144 AACEGAEKVLADTRKAYCFGTRQGP-AIAP-TLDKGQAAKIQEQENLLRSAVNAGDGLRI 201

Query: 211 PGDQRQITPAL-PMHLADALTV---NESSFPDGSTNSVYIKNTPLPSNTMXXXXXXXXXX 266
           PGDQR ITPA  P+HLADAL V   + ++ P  S+N++  +N+ L +++           
Sbjct: 202 PGDQRHITPAQPPLHLADALPVIVNDPTAQPQLSSNTMPAQNSLLQTSS----------- 250

Query: 267 XXXXXXRSAASPSAAMNTTSFDNNATASPLPYANSPRSSTNMMN 310
                 RSAASPS A +TTSFD N TASP+PYANSPRSSTNMMN
Sbjct: 251 ASQLLGRSAASPSGATSTTSFD-NTTASPIPYANSPRSSTNMMN 293



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/58 (93%), Positives = 57/58 (98%)

Query: 393 SGHVQHGIGQSQLNQGNQMTRLNQFSGPANSALFSAAQTTPNTQMIPNMSATIPSQSL 450
           SGHVQHGIGQSQLNQGNQMTRL+QFSGPANSALFSAAQTTPNTQMIPN+S T+PSQSL
Sbjct: 371 SGHVQHGIGQSQLNQGNQMTRLSQFSGPANSALFSAAQTTPNTQMIPNISGTLPSQSL 428


>Glyma13g45020.1 
          Length = 532

 Score =  387 bits (993), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/282 (71%), Positives = 229/282 (81%), Gaps = 1/282 (0%)

Query: 31  KTRAIGLFKAISRILEDFDAYARTNTTPKWQDILGQYSMLNLELFNIVDEIKKVSKAFLV 90
           KTRAI LFKAISRILEDF+AY RTN+TPKWQDILGQYSM+NLELFNIVD+IKKVSKAFLV
Sbjct: 24  KTRAISLFKAISRILEDFEAYGRTNSTPKWQDILGQYSMVNLELFNIVDDIKKVSKAFLV 83

Query: 91  YPKNVNAQNATILPVMLSSKLLPEIEIDDASKRDQLLHSMQNLPIPTQIDKLKARIDMIA 150
           +PKNVNA NATILPVMLSSKLLPE+E DD +KRDQLL  MQNLPIPTQI+KLKAR+D+I+
Sbjct: 84  HPKNVNADNATILPVMLSSKLLPEMETDDTAKRDQLLLGMQNLPIPTQIEKLKARLDLIS 143

Query: 151 AACEGAEKVLADTRKAYCFGTRQGPSSIAPTTLDKGQAAKIQEKENLLRSAVNVGEGLRI 210
           AACEGAEKVLADTRKAYCFGTRQGP++IAP TLDKGQAAKIQE+ENLLRSAVN G+GLRI
Sbjct: 144 AACEGAEKVLADTRKAYCFGTRQGPAAIAPATLDKGQAAKIQEQENLLRSAVNAGDGLRI 203

Query: 211 PGDQRQITPAL-PMHLADALTVNESSFPDGSTNSVYIKNTPLPSNTMXXXXXXXXXXXXX 269
           PGDQR ITPA  P+HLADAL V  ++ P  +     +    +                  
Sbjct: 204 PGDQRHITPAQPPLHLADALPVVIANDPTTAQPQPQLSANTMGMPAQNSLLQASSATVSQ 263

Query: 270 XXXRSAASPSAAMNTTSFDNNATASPLPYANSPRSSTNMMNT 311
              RSAASPSAA  TT+  +N TASP+PYANSPRSSTN+MN+
Sbjct: 264 LLGRSAASPSAATTTTTSFDNITASPIPYANSPRSSTNIMNS 305



 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/58 (93%), Positives = 57/58 (98%)

Query: 393 SGHVQHGIGQSQLNQGNQMTRLNQFSGPANSALFSAAQTTPNTQMIPNMSATIPSQSL 450
           SGHVQHGIGQSQLNQGNQMTRL+QFSGPANSALFSAAQTTPNTQMIPN+S T+PSQSL
Sbjct: 383 SGHVQHGIGQSQLNQGNQMTRLSQFSGPANSALFSAAQTTPNTQMIPNISGTLPSQSL 440