Miyakogusa Predicted Gene

Lj0g3v0192379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0192379.1 tr|Q9LUN3|Q9LUN3_ARATH Leucine-rich repeat
disease resistance protein-like OS=Arabidopsis thaliana
G,53.49,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.12170.1
         (85 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g06540.1                                                       124   2e-29
Glyma13g11150.1                                                       123   4e-29
Glyma02g16990.1                                                        81   3e-16
Glyma10g02810.1                                                        79   1e-15
Glyma19g33410.1                                                        69   9e-13
Glyma03g30490.1                                                        69   2e-12

>Glyma20g06540.1 
          Length = 364

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 1   MGSVPEEYVKSVCRGSTRTLYLQHNFFTGIPLEAGTVLPDTASLCLSYNCMELPPAV-MT 59
           +GSVPE YVKSVCRGSTRTLYLQHN+ TGIP+  GT++PDTASLCLSYNCM LPP V MT
Sbjct: 282 VGSVPEVYVKSVCRGSTRTLYLQHNYLTGIPMREGTLVPDTASLCLSYNCMVLPPTVMMT 341

Query: 60  CPASSGEEMSRPTTQCSVFQK 80
           CP S+G   +RP  QCSVF  
Sbjct: 342 CPVSAGGMSARPEAQCSVFNH 362


>Glyma13g11150.1 
          Length = 316

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 1   MGSVPEEYVKSVCRGSTRTLYLQHNFFTGIPLEAGTVLPDTASLCLSYNCMELPPAV-MT 59
           +GSVPE Y+KSVCRGSTRTLYLQHN+ TGIP+  GTV+PDTASLCLSYNCM  PP V MT
Sbjct: 233 VGSVPEVYIKSVCRGSTRTLYLQHNYLTGIPIRDGTVVPDTASLCLSYNCMVPPPTVMMT 292

Query: 60  CPASSGEEMSRPTTQCSVFQK 80
           CPAS+G   +RP  QCSVF  
Sbjct: 293 CPASAGGVSARPEAQCSVFNH 313


>Glyma02g16990.1 
          Length = 380

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 2   GSVPEEYVKSVCRGSTRTLYLQHNFFTGIPLEAGTVLPDTASLCLSYNCMELPPAVMTCP 61
           G VP  +V+ +   S + LYLQHN+ TGI +    V+P+ +SLCL YNCM +PP    CP
Sbjct: 300 GRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCM-VPPVETPCP 358

Query: 62  ASSGEEMSRPTTQCSVFQK 80
             +G+E +RPTTQC+  + 
Sbjct: 359 LRAGKEKTRPTTQCNQLKD 377


>Glyma10g02810.1 
          Length = 357

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)

Query: 2   GSVPEEYVKSVCRGSTRTLYLQHNFFTGIPLEAGTVLPDTASLCLSYNCMELPPAVMTCP 61
           G VP  +V+ +   S + LYLQHN+ TGI +    V+P+ +SLCL YNCM +PP    CP
Sbjct: 277 GRVPASFVERLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCM-VPPVETPCP 335

Query: 62  ASSGEEMSRPTTQCSVFQK 80
             +G+E +RPT QC+  + 
Sbjct: 336 LRAGKEKTRPTAQCNQLKD 354


>Glyma19g33410.1 
          Length = 391

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 2   GSVPEEYVKSVCRGSTRTLYLQHNFFTGIPLEAGTVLPDTASLCLSYNCMELPPAVMTCP 61
           G VP  +V+ +     + LYLQHNF TGI +     +P +++LCL YNCM +PP    CP
Sbjct: 317 GQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCM-VPPVQTACP 375

Query: 62  ASSGEEMSRPTTQCS 76
            ++G+   RP  QC+
Sbjct: 376 FNAGKRKIRPAQQCN 390


>Glyma03g30490.1 
          Length = 368

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 2   GSVPEEYVKSVCRGSTRTLYLQHNFFTGIPLEAGTVLPDTASLCLSYNCMELPPAVMTCP 61
           G VP  +V+ +     + LYLQHNF TGI +     +P +++LCL YNCM +PP    CP
Sbjct: 294 GQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCM-VPPVQTACP 352

Query: 62  ASSGEEMSRPTTQCS 76
            ++G    RP  QC+
Sbjct: 353 FNAGRRKIRPPQQCN 367