Miyakogusa Predicted Gene

Lj0g3v0191739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0191739.1 tr|G7L906|G7L906_MEDTR Peptidyl-tRNA hydrolase
OS=Medicago truncatula GN=MTR_8g103890 PE=3
SV=1,78.82,0,Pept_tRNA_hydro_bact,Peptidyl-tRNA hydrolase; seg,NULL;
Pept_tRNA_hydro,Peptidyl-tRNA hydrolase;
SUB,NODE_4872_length_1362_cov_54.908222.path1.1
         (255 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g35220.1                                                       369   e-102
Glyma08g04500.1                                                       353   1e-97
Glyma08g12110.1                                                       243   1e-64
Glyma05g28940.1                                                       242   3e-64
Glyma18g53310.1                                                       231   6e-61
Glyma08g48210.1                                                       197   8e-51
Glyma05g23140.1                                                        74   1e-13

>Glyma05g35220.1 
          Length = 259

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/199 (89%), Positives = 190/199 (95%)

Query: 57  KKKEPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPV 116
           K+  PWLIVGLGNPGKKYA+TRHNVGFEMVDTIAEAEGIS+ +VSFK+LFGKG IGDVPV
Sbjct: 61  KEASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPV 120

Query: 117 ILAKPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKS 176
           ILAKPQTYMN SGESVGAIVSYYKIP+KQVLVIFDD+DLPFAKLRLLPKGGHGGHNGMKS
Sbjct: 121 ILAKPQTYMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKS 180

Query: 177 VINHFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLE 236
           VINHFKGN GFPRLRIGIGRPPGKMDPVAFVLR+FTK EREEL+FTLQ GLEAVRILLLE
Sbjct: 181 VINHFKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLE 240

Query: 237 GFDKSATFVNSSKKMEQIG 255
           GFDKSATFVNS+KK+EQ G
Sbjct: 241 GFDKSATFVNSAKKIEQTG 259


>Glyma08g04500.1 
          Length = 235

 Score =  353 bits (906), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 176/205 (85%), Positives = 190/205 (92%), Gaps = 4/205 (1%)

Query: 55  QPKKKE---PWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVI 111
           + KKKE   PWLIVGLGNPGKKYA+TRHNVGFEMVDTIAEAEGIS+ +VSFKALFGKG I
Sbjct: 31  KEKKKEAASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKALFGKGFI 90

Query: 112 GDVPVILAKPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGH 171
           GDVPVILAKPQT+MNLSGESVG IVSYYKIPVKQVLVI DD+DLPFAKL+LLPKGGHGGH
Sbjct: 91  GDVPVILAKPQTFMNLSGESVGTIVSYYKIPVKQVLVIVDDLDLPFAKLQLLPKGGHGGH 150

Query: 172 NGMKSVINHFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQE-REELDFTLQHGLEAV 230
           NGMKSVINHFKGN GFPRLRIGIGRPPGKMDPVAFVL +FTKQ+ +  L+FTL+ GLEAV
Sbjct: 151 NGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLHTFTKQKGKRYLNFTLRDGLEAV 210

Query: 231 RILLLEGFDKSATFVNSSKKMEQIG 255
           RILLLEGFDKSATFVNS+KK+EQ G
Sbjct: 211 RILLLEGFDKSATFVNSAKKIEQTG 235


>Glyma08g12110.1 
          Length = 218

 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/195 (57%), Positives = 146/195 (74%)

Query: 60  EPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPVILA 119
            PWL VGLGNPG K+  TRHNVGFEM+D  AE++GI +++V  KA+FGKG +G+VPV LA
Sbjct: 16  RPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAIFGKGFVGEVPVFLA 75

Query: 120 KPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIN 179
           KPQTYMNLSGES G + +YYK+P+ QVLV  DDM+LP   LRL  KGGHG H G+KSVI 
Sbjct: 76  KPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIY 135

Query: 180 HFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLEGFD 239
           +F+GN  FPRLRIGIG PPG+MDP AF+L+ F    R+ +D  LQ G++A+++LL +G  
Sbjct: 136 NFRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQEGIDALKLLLSKGLT 195

Query: 240 KSATFVNSSKKMEQI 254
           +SA   N  +K + +
Sbjct: 196 ESAKRFNKEQKYKHL 210


>Glyma05g28940.1 
          Length = 217

 Score =  242 bits (617), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 114/195 (58%), Positives = 145/195 (74%)

Query: 60  EPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPVILA 119
            PWL VGLGNPG+K+  TRHNVGFEM+D  AE++GI +++V  KA+ GKG +G+VPV LA
Sbjct: 16  RPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAISGKGFVGEVPVFLA 75

Query: 120 KPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIN 179
           KPQTYMNLSGES G + +YYK+P+ QVLV  DDM+LP   LRL  KGGHG H G+KSVI 
Sbjct: 76  KPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIY 135

Query: 180 HFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLEGFD 239
           HFKGN  FPRLRIGIG PPG+MDP AF+L+ F    R+ +D  LQ G++A+++LL +G  
Sbjct: 136 HFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKLLLSKGLA 195

Query: 240 KSATFVNSSKKMEQI 254
            SA   N  +K + +
Sbjct: 196 VSAKRFNKEQKYKHL 210


>Glyma18g53310.1 
          Length = 244

 Score =  231 bits (589), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 101/192 (52%), Positives = 143/192 (74%)

Query: 61  PWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPVILAK 120
           PWLI+GLGNPG KY  TRH VGFE++D+++ AEGI +N++  KAL G G IG+VP++LAK
Sbjct: 49  PWLIIGLGNPGNKYHGTRHKVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAK 108

Query: 121 PQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVINH 180
           PQTYMN SGESVG + +YY++P++ +L++FD+  LP   LRL PKGGHG HNG+K+V+ H
Sbjct: 109 PQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGH 168

Query: 181 FKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLEGFDK 240
             G   FPRL +GIG PPG MD  A++L+ F+ +ER+++D +L+  + AVR ++L GFD+
Sbjct: 169 LDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQ 228

Query: 241 SATFVNSSKKME 252
                N  +K +
Sbjct: 229 HVNRFNLGQKYK 240


>Glyma08g48210.1 
          Length = 203

 Score =  197 bits (501), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 96/195 (49%), Positives = 136/195 (69%), Gaps = 9/195 (4%)

Query: 61  PWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGD--VPVIL 118
           PWLIVGLGNPG KY  TR NVGFE++D ++ AEGI IN++  KAL G  V+ +  VP++L
Sbjct: 7   PWLIVGLGNPGYKYHGTRDNVGFEIIDILSRAEGIQINTIQSKALIGISVLLEIEVPILL 66

Query: 119 AKPQTYMNLSGESVG---AIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMK 175
           AKPQTYMN SGESV     + +YY++P++ +L++     + +  LRL PKGGHG HNG+K
Sbjct: 67  AKPQTYMNFSGESVSWAMPLAAYYQLPLRHILLVC----ISYVILRLQPKGGHGHHNGLK 122

Query: 176 SVINHFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLL 235
           +V+ H  G   FPRL +GIG PPG MD  A++L+ F+ +ER+++D +L+  + AVR ++L
Sbjct: 123 NVMGHLDGCSDFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVVL 182

Query: 236 EGFDKSATFVNSSKK 250
            GFD+     N  +K
Sbjct: 183 NGFDQHVNRFNLGQK 197


>Glyma05g23140.1 
          Length = 105

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 41/52 (78%)

Query: 60  EPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVI 111
            PWL +GLGNP  K+  T+HNVGFEM+D  A+++GI +++V FKA+FGKG +
Sbjct: 16  RPWLFMGLGNPSDKFKGTKHNVGFEMIDAFAKSQGIPMDTVHFKAIFGKGTV 67