Miyakogusa Predicted Gene

Lj0g3v0191559.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0191559.2 tr|F9YSH8|F9YSH8_CAPCC Ribosomal RNA large
subunit methyltransferase H OS=Capnocytophaga canimorsus
,45.88,2e-16,SPOUT_MTase,SPOUT methyltransferase, predicted; no
description,NULL; alpha/beta knot,NULL,CUFF.12125.2
         (85 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g17090.1                                                       167   3e-42
Glyma17g29650.1                                                       164   2e-41

>Glyma14g17090.1 
          Length = 183

 Score =  167 bits (422), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 79/85 (92%), Positives = 83/85 (97%)

Query: 1   MLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGHGRKIRERANISIKLSSLVLNH 60
           MLDERGQDIGSEQMAELVG A NTGASRLSFCIGGPYGHGRK+RERAN+SIKLSSLVLNH
Sbjct: 99  MLDERGQDIGSEQMAELVGDAGNTGASRLSFCIGGPYGHGRKMRERANLSIKLSSLVLNH 158

Query: 61  QIALLVLMEQLYRSWTILRGQKYHH 85
           QIALLVL+EQLYRSWTIL+GQKYHH
Sbjct: 159 QIALLVLVEQLYRSWTILKGQKYHH 183


>Glyma17g29650.1 
          Length = 167

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/85 (91%), Positives = 82/85 (96%)

Query: 1   MLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGHGRKIRERANISIKLSSLVLNH 60
           MLDERGQDI SEQMAELVG A NTGASRLSFCIGGPYGHGRK+R+RAN+SIKLSSLVLNH
Sbjct: 83  MLDERGQDIESEQMAELVGDAGNTGASRLSFCIGGPYGHGRKMRQRANLSIKLSSLVLNH 142

Query: 61  QIALLVLMEQLYRSWTILRGQKYHH 85
           QIALLVLMEQLYRSWTIL+GQKYHH
Sbjct: 143 QIALLVLMEQLYRSWTILKGQKYHH 167