Miyakogusa Predicted Gene

Lj0g3v0191559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0191559.1 tr|Q26C76|Q26C76_FLABB Ribosomal RNA large
subunit methyltransferase H OS=Flavobacteria bacterium
(s,42.71,1e-18,SPOUT_MTase,SPOUT methyltransferase, predicted; no
description,NULL; alpha/beta knot,NULL,CUFF.12125.1
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g17090.1                                                       189   6e-49
Glyma17g29650.1                                                       187   3e-48

>Glyma14g17090.1 
          Length = 183

 Score =  189 bits (480), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 89/96 (92%), Positives = 94/96 (97%)

Query: 1   MNIIRSDDWVVMLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGHGRKIRERANI 60
           MN+IRSDDWVVMLDERGQDIGSEQMAELVG A NTGASRLSFCIGGPYGHGRK+RERAN+
Sbjct: 88  MNLIRSDDWVVMLDERGQDIGSEQMAELVGDAGNTGASRLSFCIGGPYGHGRKMRERANL 147

Query: 61  SIKLSSLVLNHQIALLVLMEQLYRSWTILRGQKYHH 96
           SIKLSSLVLNHQIALLVL+EQLYRSWTIL+GQKYHH
Sbjct: 148 SIKLSSLVLNHQIALLVLVEQLYRSWTILKGQKYHH 183


>Glyma17g29650.1 
          Length = 167

 Score =  187 bits (474), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/96 (91%), Positives = 93/96 (96%)

Query: 1   MNIIRSDDWVVMLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGHGRKIRERANI 60
           MN+IRSDDWVVMLDERGQDI SEQMAELVG A NTGASRLSFCIGGPYGHGRK+R+RAN+
Sbjct: 72  MNLIRSDDWVVMLDERGQDIESEQMAELVGDAGNTGASRLSFCIGGPYGHGRKMRQRANL 131

Query: 61  SIKLSSLVLNHQIALLVLMEQLYRSWTILRGQKYHH 96
           SIKLSSLVLNHQIALLVLMEQLYRSWTIL+GQKYHH
Sbjct: 132 SIKLSSLVLNHQIALLVLMEQLYRSWTILKGQKYHH 167