Miyakogusa Predicted Gene

Lj0g3v0190769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190769.1 Non Chatacterized Hit- tr|F4JHF7|F4JHF7_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At4,51.52,3e-19,UNKNOWN PROTEIN,NULL; GAMMA TUBULIN COMPLEX
PROTEIN,Spc97/Spc98,CUFF.12086.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g40100.1                                                       213   5e-56
Glyma15g40100.2                                                       212   1e-55
Glyma08g18780.3                                                       207   2e-54
Glyma08g18780.2                                                       207   2e-54
Glyma08g18780.1                                                       207   2e-54
Glyma08g18780.4                                                       164   3e-41

>Glyma15g40100.1 
          Length = 175

 Score =  213 bits (542), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 105/136 (77%), Positives = 123/136 (90%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
           MVE D + ETRVEDVAWLCSLSESEIDMLISLKLLII+RAKM+ CKELA+KF+LKM+R I
Sbjct: 40  MVEPDKNCETRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAI 99

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADIQTFLR 120
           A VLM HLK E+KDSSLIP++VKST+FL+ACNLL+C+NEV A+IDELS ++GADI+TFLR
Sbjct: 100 ALVLMGHLKEEIKDSSLIPNMVKSTSFLDACNLLKCSNEVDANIDELSTSLGADIETFLR 159

Query: 121 RPPTSKRKKQKVVSSE 136
            PPTSK+KKQKV S E
Sbjct: 160 SPPTSKQKKQKVGSRE 175


>Glyma15g40100.2 
          Length = 151

 Score =  212 bits (539), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/136 (77%), Positives = 123/136 (90%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
           MVE D + ETRVEDVAWLCSLSESEIDMLISLKLLII+RAKM+ CKELA+KF+LKM+R I
Sbjct: 16  MVEPDKNCETRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAI 75

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADIQTFLR 120
           A VLM HLK E+KDSSLIP++VKST+FL+ACNLL+C+NEV A+IDELS ++GADI+TFLR
Sbjct: 76  ALVLMGHLKEEIKDSSLIPNMVKSTSFLDACNLLKCSNEVDANIDELSTSLGADIETFLR 135

Query: 121 RPPTSKRKKQKVVSSE 136
            PPTSK+KKQKV S E
Sbjct: 136 SPPTSKQKKQKVGSRE 151


>Glyma08g18780.3 
          Length = 154

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 123/139 (88%), Gaps = 3/139 (2%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
           MVE D + ETRVEDVAWLCSLSESEIDMLISLKLLII+RAKM+ CKELA+KF+LKM+R I
Sbjct: 16  MVEPDKNCETRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAI 75

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADI---QT 117
           A VLMEHLKAE+K SSLIP+ V+ST+FL+ACNLL+C+NEV A+ID+LS ++GADI   QT
Sbjct: 76  ALVLMEHLKAEIKGSSLIPNTVESTSFLDACNLLKCSNEVDANIDDLSASLGADISDMQT 135

Query: 118 FLRRPPTSKRKKQKVVSSE 136
           FLR PPTSK+KKQKV S E
Sbjct: 136 FLRSPPTSKQKKQKVGSRE 154


>Glyma08g18780.2 
          Length = 154

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 123/139 (88%), Gaps = 3/139 (2%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
           MVE D + ETRVEDVAWLCSLSESEIDMLISLKLLII+RAKM+ CKELA+KF+LKM+R I
Sbjct: 16  MVEPDKNCETRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAI 75

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADI---QT 117
           A VLMEHLKAE+K SSLIP+ V+ST+FL+ACNLL+C+NEV A+ID+LS ++GADI   QT
Sbjct: 76  ALVLMEHLKAEIKGSSLIPNTVESTSFLDACNLLKCSNEVDANIDDLSASLGADISDMQT 135

Query: 118 FLRRPPTSKRKKQKVVSSE 136
           FLR PPTSK+KKQKV S E
Sbjct: 136 FLRSPPTSKQKKQKVGSRE 154


>Glyma08g18780.1 
          Length = 154

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 105/139 (75%), Positives = 123/139 (88%), Gaps = 3/139 (2%)

Query: 1   MVELDNSSETRVEDVAWLCSLSESEIDMLISLKLLIIRRAKMIDCKELANKFDLKMLRVI 60
           MVE D + ETRVEDVAWLCSLSESEIDMLISLKLLII+RAKM+ CKELA+KF+LKM+R I
Sbjct: 16  MVEPDKNCETRVEDVAWLCSLSESEIDMLISLKLLIIQRAKMMGCKELASKFNLKMIRAI 75

Query: 61  AFVLMEHLKAEVKDSSLIPDVVKSTAFLEACNLLQCNNEVAASIDELSMNVGADI---QT 117
           A VLMEHLKAE+K SSLIP+ V+ST+FL+ACNLL+C+NEV A+ID+LS ++GADI   QT
Sbjct: 76  ALVLMEHLKAEIKGSSLIPNTVESTSFLDACNLLKCSNEVDANIDDLSASLGADISDMQT 135

Query: 118 FLRRPPTSKRKKQKVVSSE 136
           FLR PPTSK+KKQKV S E
Sbjct: 136 FLRSPPTSKQKKQKVGSRE 154


>Glyma08g18780.4 
          Length = 112

 Score =  164 bits (415), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 82/112 (73%), Positives = 99/112 (88%), Gaps = 3/112 (2%)

Query: 28  MLISLKLLIIRRAKMIDCKELANKFDLKMLRVIAFVLMEHLKAEVKDSSLIPDVVKSTAF 87
           MLISLKLLII+RAKM+ CKELA+KF+LKM+R IA VLMEHLKAE+K SSLIP+ V+ST+F
Sbjct: 1   MLISLKLLIIQRAKMMGCKELASKFNLKMIRAIALVLMEHLKAEIKGSSLIPNTVESTSF 60

Query: 88  LEACNLLQCNNEVAASIDELSMNVGADI---QTFLRRPPTSKRKKQKVVSSE 136
           L+ACNLL+C+NEV A+ID+LS ++GADI   QTFLR PPTSK+KKQKV S E
Sbjct: 61  LDACNLLKCSNEVDANIDDLSASLGADISDMQTFLRSPPTSKQKKQKVGSRE 112