Miyakogusa Predicted Gene

Lj0g3v0190579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190579.1 tr|A2Q1M9|A2Q1M9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,82.76,0.0000001,seg,NULL,CUFF.12076.1
         (46 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g17500.1                                                        55   2e-08
Glyma09g06230.1                                                        51   2e-07

>Glyma15g17500.1 
          Length = 829

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 26/29 (89%), Gaps = 1/29 (3%)

Query: 1  MEGTLFPNRPVLPVPANKPTQS-LKFKPT 28
          MEGTLFPNRPVLP P++KPTQ  LKFKPT
Sbjct: 1  MEGTLFPNRPVLPAPSHKPTQQPLKFKPT 29


>Glyma09g06230.1 
          Length = 830

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 28/31 (90%), Gaps = 1/31 (3%)

Query: 1  MEGTLFPNRPVLPVPANKPTQ-SLKFKPTLL 30
          MEGTLFPNRPVLPVP++KPTQ  LKFKPT L
Sbjct: 1  MEGTLFPNRPVLPVPSHKPTQPPLKFKPTFL 31