Miyakogusa Predicted Gene

Lj0g3v0190089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0190089.1 Non Chatacterized Hit- tr|I1JGQ7|I1JGQ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40037
PE,43.53,0.000000007, ,CUFF.12059.1
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36630.1                                                        65   3e-11
Glyma02g36630.2                                                        60   6e-10
Glyma17g27180.1                                                        48   4e-06

>Glyma02g36630.1 
          Length = 332

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 9/85 (10%)

Query: 76  IEDMPQPRF---MDPAEINQDEVI--PPAKPDTDLYDAKRKAEAPAVND----SQICLIQ 126
           I    QPR    +D  + N+D+VI    AKPD D Y AKRKA  P   D    S   + +
Sbjct: 139 IFGGSQPRLPPQIDIKQSNKDKVIILAGAKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEK 198

Query: 127 KPKKEWACMLCRVTASDENSLNVHL 151
           KPK+EW+C LC++T ++E  LN HL
Sbjct: 199 KPKREWSCGLCQITTTNEKGLNNHL 223


>Glyma02g36630.2 
          Length = 326

 Score = 60.5 bits (145), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 11/83 (13%)

Query: 76  IEDMPQPRF---MDPAEINQDEVIPPAKPDTDLYDAKRKAEAPAVND----SQICLIQKP 128
           I    QPR    +D  + N+D+    AKPD D Y AKRKA  P   D    S   + +KP
Sbjct: 139 IFGGSQPRLPPQIDIKQSNKDK----AKPDVDPYGAKRKAGKPPTIDDNHHSGFSVEKKP 194

Query: 129 KKEWACMLCRVTASDENSLNVHL 151
           K+EW+C LC++T ++E  LN HL
Sbjct: 195 KREWSCGLCQITTTNEKGLNNHL 217


>Glyma17g27180.1 
          Length = 361

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 88  AEINQDEVIPPAKPDTDLYDAKRKAEAPAVNDSQICLIQKPKKEWACMLCRVTASDENSL 147
           A  ++D+VI   KPD D    KRKA   A++D++  L +K KKEW C LC+++ + E  L
Sbjct: 165 ASNSKDKVIILNKPD-DHCGEKRKAITLAIDDNE-SLRKKAKKEWTCELCQISTTSEKGL 222

Query: 148 NVHLK 152
           N H++
Sbjct: 223 NDHIQ 227