Miyakogusa Predicted Gene

Lj0g3v0188969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188969.1 Non Chatacterized Hit- tr|I1MSR6|I1MSR6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19477
PE,63.16,0.0000000005,seg,NULL,CUFF.12027.1
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g07130.2                                                        69   4e-12
Glyma17g07130.1                                                        68   6e-12
Glyma13g01030.2                                                        66   3e-11
Glyma13g01030.1                                                        65   4e-11
Glyma13g01030.3                                                        65   4e-11

>Glyma17g07130.2 
          Length = 272

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 38/57 (66%), Gaps = 14/57 (24%)

Query: 131 RPKISSSGFRLAPNTLTEPVRE--------------LVVFPNPYREDPGKALRDWDL 173
           R  ISSSGF  APNTLTEPV +              LVVFPNP+REDPGKALRDWDL
Sbjct: 83  RADISSSGFGSAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDL 139


>Glyma17g07130.1 
          Length = 281

 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 38/57 (66%), Gaps = 14/57 (24%)

Query: 131 RPKISSSGFRLAPNTLTEPVRE--------------LVVFPNPYREDPGKALRDWDL 173
           R  ISSSGF  APNTLTEPV +              LVVFPNP+REDPGKALRDWDL
Sbjct: 83  RADISSSGFGSAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPFREDPGKALRDWDL 139


>Glyma13g01030.2 
          Length = 208

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 14/54 (25%)

Query: 134 ISSSGFRLAPNTLTEPVRE--------------LVVFPNPYREDPGKALRDWDL 173
           I++SGF  APNTLTEPV +              LVVFPNPYREDPGKALRDWDL
Sbjct: 88  IATSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDL 141


>Glyma13g01030.1 
          Length = 274

 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 14/54 (25%)

Query: 134 ISSSGFRLAPNTLTEPVRE--------------LVVFPNPYREDPGKALRDWDL 173
           I++SGF  APNTLTEPV +              LVVFPNPYREDPGKALRDWDL
Sbjct: 88  IATSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDL 141


>Glyma13g01030.3 
          Length = 171

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/54 (62%), Positives = 37/54 (68%), Gaps = 14/54 (25%)

Query: 134 ISSSGFRLAPNTLTEPVRE--------------LVVFPNPYREDPGKALRDWDL 173
           I++SGF  APNTLTEPV +              LVVFPNPYREDPGKALRDWDL
Sbjct: 88  IATSGFGPAPNTLTEPVWDTVKRDLSRIVSNLKLVVFPNPYREDPGKALRDWDL 141