Miyakogusa Predicted Gene

Lj0g3v0187539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0187539.1 Non Chatacterized Hit- tr|D8QRI3|D8QRI3_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,54.32,5e-19,AUTOPHAGY PROTEIN 12,Autophagy-related protein
12; Ubiquitin-like,NULL; APG12,Autophagy-related prot,CUFF.11935.1
         (94 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g00940.1                                                       189   9e-49
Glyma07g04250.1                                                       187   2e-48

>Glyma16g00940.1 
          Length = 94

 Score =  189 bits (479), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 87/94 (92%), Positives = 92/94 (97%)

Query: 1  MSVESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRDTLFVYVNS 60
          MS ESPSS RKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHR+TLFVY+NS
Sbjct: 1  MSAESPSSARKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYINS 60

Query: 61 AFSPNPDELIIDLYNNFGFDGKLIVNYACSMAWG 94
          AFSPNPDEL+IDL+NNFGFDGKL+VNYACSMAWG
Sbjct: 61 AFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 94


>Glyma07g04250.1 
          Length = 94

 Score =  187 bits (475), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 88/94 (93%), Positives = 92/94 (97%)

Query: 1  MSVESPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRDTLFVYVNS 60
          MS E PSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHR+TLFVYVNS
Sbjct: 1  MSSELPSSVRKVVVHLRATGDAPILKQSKFKIAGTDKFAKVIDFLRRQLHRETLFVYVNS 60

Query: 61 AFSPNPDELIIDLYNNFGFDGKLIVNYACSMAWG 94
          AFSPNPDEL+IDL+NNFGFDGKL+VNYACSMAWG
Sbjct: 61 AFSPNPDELVIDLFNNFGFDGKLVVNYACSMAWG 94