Miyakogusa Predicted Gene

Lj0g3v0186219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0186219.1 Non Chatacterized Hit- tr|F4IN72|F4IN72_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At2,64.91,0.000000000000009,seg,NULL; RNase III
domain-like,Ribonuclease III domain; Ribonuclease III
family,Ribonuclease III
do,NODE_34288_length_1750_cov_19.158857.path1.1
         (538 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39960.1                                                       779   0.0  
Glyma11g05330.1                                                       774   0.0  
Glyma17g17780.1                                                       560   e-159
Glyma05g22240.1                                                       481   e-135
Glyma05g22230.1                                                       308   1e-83

>Glyma01g39960.1 
          Length = 525

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/532 (72%), Positives = 440/532 (82%), Gaps = 12/532 (2%)

Query: 11  MELSSSFLLPHKPLHSS--SYLHNPLRITTKTRHPTTQILRISAVAIDPPPQ-ELPQ-NS 66
           MELSSSFL   KP      +Y  +PL    + R+P     RI AVA++P  Q + P  NS
Sbjct: 1   MELSSSFLFSPKPCSCPPPNYSLSPL---IRNRNPN---FRIVAVALEPQQQQDFPSGNS 54

Query: 67  PRRLLQELAEXXXXXXXXXXXXXXFVLTPPVNDKKLANRLLNSPQLTLNNFPVLSSCLPY 126
           P+RLL+ELAE              F+L PP++D KLA R LNSPQL L  FP+LSSCLP 
Sbjct: 55  PQRLLKELAERKKATSPKKGPPRRFILRPPIDDNKLAERFLNSPQLCLKLFPLLSSCLPS 114

Query: 127 AKLNDNDNAWMEEHLMEAKQALGYPLEPSEEVMMGEGNPAKMLDTLLYLAFQHPKCERSR 186
           ++LN+ D  W++E+L+EAKQALGY LEPSE   +G+ NPAK  DTLLYLAFQHP CER++
Sbjct: 115 SRLNNADKLWIDEYLLEAKQALGYSLEPSE--TLGDDNPAKQFDTLLYLAFQHPSCERTK 172

Query: 187 ARHVRCAHSRLVFLGQYVLELALAEFFLQRYPRESPGPMRERVFGLIGKRSLPMWIKAAS 246
           ARHVR  HSRL FLGQYVLELAL EFFLQRYPRESPGPMRERVFGLIGKRSLP WIKAAS
Sbjct: 173 ARHVRSGHSRLSFLGQYVLELALTEFFLQRYPRESPGPMRERVFGLIGKRSLPKWIKAAS 232

Query: 247 LQNLIFPNVNMDKLVRKDREPIVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDLEAEYC 306
           L NLIF   +MDK++R+++E  VKSVFWALFGAIYLCFGMPEVYRVLFEVFGMD +AE C
Sbjct: 233 LHNLIFTFDDMDKIMRREKEGPVKSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEDC 292

Query: 307 QPKLRRQLEDIDHVSAEFKGKLSWQDVVAYKPPADALFANPRLFRACIPPGMHRFRGNIW 366
           QPKLRRQLED+D+VSAEF+GKLSWQD+VAYKPPADALF +PRLFRAC+PPGMHRFRGNIW
Sbjct: 293 QPKLRRQLEDVDYVSAEFEGKLSWQDIVAYKPPADALFEHPRLFRACVPPGMHRFRGNIW 352

Query: 367 DYDSRPQVMRILGYPLDMEDRIPGITDARNIELGLGLQLCFLHPSNYKFEHPRFCYERLE 426
           DYD+RP VM+ LGYPL+M DRIP IT+ARN+ELGLGLQLCF+HPS +KFEHPRFCYERLE
Sbjct: 353 DYDTRPHVMKTLGYPLEMTDRIPEITEARNVELGLGLQLCFMHPSKFKFEHPRFCYERLE 412

Query: 427 YLGQKIQDLVMAERLLMKHLDAPGFWIQEKHRRILMNKYCGRYLRAKQLHHYIIYSDKVK 486
           Y+GQKIQDLVMAERLLMKHLDAPG W+QEKHRR+LMNKYCGRYLRAK LH  II+ +KV+
Sbjct: 413 YIGQKIQDLVMAERLLMKHLDAPGLWLQEKHRRLLMNKYCGRYLRAKHLHRVIIFDEKVQ 472

Query: 487 DAYGRSHRLRNPATTSVQQALHGLSYAVYGKRDVRRLMFEVFDYEQVQPRTI 538
           D Y  + R RNPATT+VQQALHGLSY VYGKRDVRRLMFEVFD+EQ+QP+ +
Sbjct: 473 DTYEHNRRKRNPATTAVQQALHGLSYLVYGKRDVRRLMFEVFDFEQIQPKEV 524


>Glyma11g05330.1 
          Length = 540

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/540 (70%), Positives = 435/540 (80%), Gaps = 13/540 (2%)

Query: 11  MELSSSFLLPHKPLHSSSYLHNP-----------LRITTKTRHPTTQILRISAVAIDPPP 59
           MELSSSFLL  KP  S     +            L     ++ P T   RI AVA++P  
Sbjct: 1   MELSSSFLLSPKPCSSPPPNFSFSSSLSPFPIQLLIRNGNSKFPQTPPFRIIAVALEPQ- 59

Query: 60  QELPQ-NSPRRLLQELAEXXXXXXXXXXXXXXFVLTPPVNDKKLANRLLNSPQLTLNNFP 118
           Q+ P  NSP+RLL+ELAE              F+L PP++D KLA R LNSPQL+L +FP
Sbjct: 60  QDFPSGNSPQRLLKELAERKKATSPKKGPPRRFILRPPIDDNKLAERFLNSPQLSLKSFP 119

Query: 119 VLSSCLPYAKLNDNDNAWMEEHLMEAKQALGYPLEPSEEVMMGEGNPAKMLDTLLYLAFQ 178
           +LSSCLP ++LN+ D  W++E+L+EAKQALGY LEPSE +     NPAK  DTLLYLAFQ
Sbjct: 120 LLSSCLPSSRLNNADKLWIDEYLLEAKQALGYSLEPSETLGDDNDNPAKQFDTLLYLAFQ 179

Query: 179 HPKCERSRARHVRCAHSRLVFLGQYVLELALAEFFLQRYPRESPGPMRERVFGLIGKRSL 238
           HP CER++ARHVR  HSRL FLGQYVLELAL EFFLQRYPRESPGPMRERVFGLIGKR+L
Sbjct: 180 HPSCERTKARHVRSGHSRLSFLGQYVLELALTEFFLQRYPRESPGPMRERVFGLIGKRNL 239

Query: 239 PMWIKAASLQNLIFPNVNMDKLVRKDREPIVKSVFWALFGAIYLCFGMPEVYRVLFEVFG 298
           P WIKAASL NL+F   +MDK+ R ++E  VKSVFWALFGAIYLCFGMPEVYRVLFEVFG
Sbjct: 240 PKWIKAASLHNLVFTFDDMDKIRRTEKEGPVKSVFWALFGAIYLCFGMPEVYRVLFEVFG 299

Query: 299 MDLEAEYCQPKLRRQLEDIDHVSAEFKGKLSWQDVVAYKPPADALFANPRLFRACIPPGM 358
           MD +AE CQPKLRRQLED+D VSAEF+GKLSWQD+VAYKPPADALF +PRLFRAC+PPGM
Sbjct: 300 MDPDAEDCQPKLRRQLEDVDFVSAEFEGKLSWQDIVAYKPPADALFEHPRLFRACVPPGM 359

Query: 359 HRFRGNIWDYDSRPQVMRILGYPLDMEDRIPGITDARNIELGLGLQLCFLHPSNYKFEHP 418
           HRFRGNIWDYD+RP VM+ LGYPL+M DRIP IT+ARNIELGLGLQLCF+HPS YKFEHP
Sbjct: 360 HRFRGNIWDYDTRPHVMKTLGYPLEMADRIPEITEARNIELGLGLQLCFMHPSKYKFEHP 419

Query: 419 RFCYERLEYLGQKIQDLVMAERLLMKHLDAPGFWIQEKHRRILMNKYCGRYLRAKQLHHY 478
           RFCYERLEY+GQKIQDLVMAERLLMKHLDAPG W+QE+HR +LMNKYCGRYLRAK LH  
Sbjct: 420 RFCYERLEYVGQKIQDLVMAERLLMKHLDAPGLWLQERHRHLLMNKYCGRYLRAKHLHRV 479

Query: 479 IIYSDKVKDAYGRSHRLRNPATTSVQQALHGLSYAVYGKRDVRRLMFEVFDYEQVQPRTI 538
           II+ DKV+D Y  + R RNPATT+VQQALHGLSY VYGKRDVRRLMFEVFD+EQ+QP+ +
Sbjct: 480 IIFDDKVQDTYEHNRRKRNPATTAVQQALHGLSYLVYGKRDVRRLMFEVFDFEQIQPKEV 539


>Glyma17g17780.1 
          Length = 463

 Score =  560 bits (1442), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 282/444 (63%), Positives = 324/444 (72%), Gaps = 58/444 (13%)

Query: 91  FVLTPPVNDKKLANRLLNSPQLTLNNFPVLSSCLPYAKLNDNDNAWMEEHLMEAKQALGY 150
           F+LT P++DK++A+R L+SPQL LN FP LSSCLP+A L   DN WME+H      ALGY
Sbjct: 74  FILTRPLDDKRVADRFLSSPQLALNTFPFLSSCLPFAPLGHVDNIWMEKH------ALGY 127

Query: 151 PLEPSEEVMMGEGNPAKMLDTLLYLAFQHPKCERSRARHVRCAHSRLVFLGQYVLELALA 210
           PLEPS   +  +  PA+ LDTLLYLAFQH  CE+SRARHVR  HSRL FLGQYV E    
Sbjct: 128 PLEPSV-TLRDDSKPARELDTLLYLAFQHEVCEKSRARHVRFGHSRLFFLGQYVTE---- 182

Query: 211 EFFLQRYPRESPGPMRERVFGLIGKRSLPMWIKAASLQNLIFPNVNMDKLVRKDREPIVK 270
                               G+ G        + A ++ + FP  +MDKLVRK+RE  VK
Sbjct: 183 --------------------GVAGAD------EGAGVRGVGFPYDDMDKLVRKEREATVK 216

Query: 271 SVFWALFGAIYLCFGMPEVYRVLFEVFGMDLEAEYCQPKLRRQLEDIDHVSAEFKGKLSW 330
           SVFWALFGAIYLCFGMPEVYRVLFEVFGMD  AE CQPKL RQLEDIDHVSAEF+GK+SW
Sbjct: 217 SVFWALFGAIYLCFGMPEVYRVLFEVFGMDPNAEDCQPKLCRQLEDIDHVSAEFEGKISW 276

Query: 331 QDVVAYKPPADALFANPRLFRACIPPGMHRFRGNIWDYDSRPQVMRILGYPLDMEDRIPG 390
           QD++  +    ALFA+PRLFRAC+PP MH+FRGN+WDYD RPQ+M++LGYPL M+DRIP 
Sbjct: 277 QDMLCMQNSCYALFAHPRLFRACVPPSMHQFRGNLWDYDCRPQIMQVLGYPLKMKDRIPE 336

Query: 391 ITDARNIELGLGLQLCFLHPSNYKFEHPRFCYERLEYLGQKIQDLVMAERLLMKHLDAPG 450
           IT ARNIEL LGLQLCFLHPS YKF+HP+F YERLEYLGQKIQD VMAERLLMKHLDAPG
Sbjct: 337 ITKARNIELDLGLQLCFLHPSKYKFDHPQFFYERLEYLGQKIQDSVMAERLLMKHLDAPG 396

Query: 451 FWIQEKHRRILMNKYCGRYLRAKQLHHYIIYSDKVKDAYGRSHRLRNPATTSVQQALHGL 510
            W+Q +HRR LMNKYCGRYL+AK  HH+ IY +K                     ALHGL
Sbjct: 397 LWLQNRHRRFLMNKYCGRYLKAKNCHHFTIYDEK---------------------ALHGL 435

Query: 511 SYAVYGKRDVRRLMFEVFDYEQVQ 534
           SY VYGKRDVRRLMFEVFD++Q Q
Sbjct: 436 SYVVYGKRDVRRLMFEVFDFKQTQ 459


>Glyma05g22240.1 
          Length = 265

 Score =  481 bits (1237), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/269 (83%), Positives = 246/269 (91%), Gaps = 4/269 (1%)

Query: 270 KSVFWALFGAIYLCFGMPEVYRVLFEVFGMDLEAEYCQPKLRRQLEDIDHVSAEFKGKLS 329
           +SVFWALFGAIYLCFGMPEVYRVLFEVFGMD +AE CQPKLRRQLEDIDHVSAEF+GK+S
Sbjct: 1   RSVFWALFGAIYLCFGMPEVYRVLFEVFGMDPDAEDCQPKLRRQLEDIDHVSAEFEGKIS 60

Query: 330 WQDVVAYKPPADALFANPRLFRACIPPGMHRFRGNIWDYDSRPQVMRILGYPLDMEDRIP 389
           WQD+    PPADALFA+PRLFRAC+PPGMHRFRGN+WDYD RPQ+MR+LGYPL M DRIP
Sbjct: 61  WQDM----PPADALFAHPRLFRACVPPGMHRFRGNLWDYDCRPQIMRVLGYPLKMTDRIP 116

Query: 390 GITDARNIELGLGLQLCFLHPSNYKFEHPRFCYERLEYLGQKIQDLVMAERLLMKHLDAP 449
            IT ARNIEL LGLQLCFLHPS YKF+HPRFCYERLEYLGQKIQDLVMAERLLMKHLDAP
Sbjct: 117 EITKARNIELDLGLQLCFLHPSKYKFDHPRFCYERLEYLGQKIQDLVMAERLLMKHLDAP 176

Query: 450 GFWIQEKHRRILMNKYCGRYLRAKQLHHYIIYSDKVKDAYGRSHRLRNPATTSVQQALHG 509
           G W+Q +HRR LMNKYCGRYLRAK LHH+IIY++KV+DAY R++RL+ P TTSVQQALHG
Sbjct: 177 GLWLQNRHRRFLMNKYCGRYLRAKNLHHFIIYNEKVQDAYQRAYRLKYPVTTSVQQALHG 236

Query: 510 LSYAVYGKRDVRRLMFEVFDYEQVQPRTI 538
           LSYAVYGKRDVRRLMFEVFD+EQ QP  +
Sbjct: 237 LSYAVYGKRDVRRLMFEVFDFEQTQPEAM 265



 Score = 59.3 bits (142), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 7/186 (3%)

Query: 119 VLSSCLPYAKLNDNDNAWMEEHLMEAKQALGYPLEPSEEVMMGEGNPAKMLDTLLYLAFQ 178
           +  +C+P        N W  +   +  + LGYPL+ ++ +          LD  L L F 
Sbjct: 76  LFRACVPPGMHRFRGNLWDYDCRPQIMRVLGYPLKMTDRIPEITKARNIELDLGLQLCFL 135

Query: 179 HPKCERSRARHVRCAHSRLVFLGQYVLELALAEFFLQRYPRESPGP-MRERVFGLIGKRS 237
           HP   + +  H R  + RL +LGQ + +L +AE  L ++  ++PG  ++ R    +  + 
Sbjct: 136 HP--SKYKFDHPRFCYERLEYLGQKIQDLVMAERLLMKH-LDAPGLWLQNRHRRFLMNKY 192

Query: 238 LPMWIKAASLQNLIFPNVNMDKLVRKD---REPIVKSVFWALFGAIYLCFGMPEVYRVLF 294
              +++A +L + I  N  +    ++    + P+  SV  AL G  Y  +G  +V R++F
Sbjct: 193 CGRYLRAKNLHHFIIYNEKVQDAYQRAYRLKYPVTTSVQQALHGLSYAVYGKRDVRRLMF 252

Query: 295 EVFGMD 300
           EVF  +
Sbjct: 253 EVFDFE 258


>Glyma05g22230.1 
          Length = 267

 Score =  308 bits (788), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 171/269 (63%), Positives = 195/269 (72%), Gaps = 15/269 (5%)

Query: 5   SSPHTQ-MELSSSFLLPHKPLHSSSYLHNPLRITTKTRHPTTQILRISAVAIDPPPQELP 63
           S+ HT  MELSSSF   H     SS L   LR          Q LR+SAV IDPP QELP
Sbjct: 11  SNVHTSPMELSSSFTHSHNLFSFSSSLTPTLR---------RQTLRVSAVTIDPP-QELP 60

Query: 64  QNSPRRLLQELAE-XXXXXXXXXXXXXXFVLTPPVNDKKLANRLLNSPQLTLNNFPVLSS 122
           +NSP+RLL+ELAE               F+LT P++DK++A+R LNSPQL LN FP+LSS
Sbjct: 61  KNSPQRLLKELAERKRPSPRTPRAPPRRFILTRPLDDKRVADRFLNSPQLALNTFPLLSS 120

Query: 123 CLPYAKLNDNDNAWMEEHLMEAKQALGYPLEPSEEVMMGE-GNPAKMLDTLLYLAFQHPK 181
           CLP++ L+  D +WME HLMEAKQALGYPLEPS  + +G+   PA  LDTLLYLAFQH  
Sbjct: 121 CLPFSPLDHLDKSWMENHLMEAKQALGYPLEPS--LTLGDDSGPAMELDTLLYLAFQHES 178

Query: 182 CERSRARHVRCAHSRLVFLGQYVLELALAEFFLQRYPRESPGPMRERVFGLIGKRSLPMW 241
           CERSRARHVR  HSRL FLGQYVLELALAE+FLQRYPRESP PMRERVF LIGKRSLP W
Sbjct: 179 CERSRARHVRFGHSRLFFLGQYVLELALAEYFLQRYPRESPAPMRERVFELIGKRSLPRW 238

Query: 242 IKAASLQNLIFPNVNMDKLVRKDREPIVK 270
           IK A+L NL+FP  +MDKLVRK+RE  VK
Sbjct: 239 IKGAALHNLVFPYDDMDKLVRKEREATVK 267