Miyakogusa Predicted Gene

Lj0g3v0185729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0185729.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,83.24,0,PROTEIN
TRANSPORT PROTEIN SEC23,NULL; zf-Sec23_Sec24,Zinc finger,
Sec23/Sec24-type; Sec23_trunk,Sec2,CUFF.11805.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g22740.1                                                       320   4e-88
Glyma16g09230.1                                                       314   3e-86
Glyma18g00670.1                                                       218   3e-57
Glyma11g36760.1                                                       212   3e-55
Glyma18g00420.1                                                       120   1e-27
Glyma03g38830.1                                                        57   9e-09
Glyma03g38830.2                                                        57   1e-08
Glyma19g41400.2                                                        57   1e-08
Glyma19g41400.1                                                        57   1e-08
Glyma03g38330.1                                                        54   1e-07
Glyma19g40920.1                                                        52   4e-07
Glyma10g28520.1                                                        52   5e-07

>Glyma03g22740.1 
          Length = 767

 Score =  320 bits (821), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 151/197 (76%), Positives = 170/197 (86%), Gaps = 13/197 (6%)

Query: 1   MAEFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTC 60
           MAEF+DLESQDGVRMPWNVIPGTKQ+A NAVVP++A+YTPIKHFPSMPVL Y+PLRCRTC
Sbjct: 1   MAEFLDLESQDGVRMPWNVIPGTKQDAQNAVVPISAVYTPIKHFPSMPVLNYSPLRCRTC 60

Query: 61  RSILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDS----- 115
           RS+LNPFC+VDF AKIWICPFCF RNHFPPHY+SISDD+LPAELFP YTTVEY+S     
Sbjct: 61  RSVLNPFCIVDFAAKIWICPFCFQRNHFPPHYSSISDDSLPAELFPQYTTVEYNSDAAVG 120

Query: 116 PSDTSPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG 175
           P+  +P VPPVFLFV+DTCVIEEEIGFLRSA++Q VELLPENSLVGLITFGTFVHVH  G
Sbjct: 121 PTYNNPSVPPVFLFVVDTCVIEEEIGFLRSALAQAVELLPENSLVGLITFGTFVHVHELG 180

Query: 176 SVLSPKPTFSGAPRTFL 192
                   F   P+T++
Sbjct: 181 --------FGAVPKTYV 189


>Glyma16g09230.1 
          Length = 516

 Score =  314 bits (805), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 150/196 (76%), Positives = 168/196 (85%), Gaps = 13/196 (6%)

Query: 1   MAEFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTC 60
           MAEF+DLESQDGVRMPWNVIPGTKQ+A NAVVPV+A+YTPIKHF SMP+L Y+PLRCRTC
Sbjct: 1   MAEFLDLESQDGVRMPWNVIPGTKQDAQNAVVPVSAVYTPIKHFTSMPLLNYSPLRCRTC 60

Query: 61  RSILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDS----P 116
           RS+LNPFC+VDF AKIWICPFCF RNHFPPHYASISDD+LPAELFP YTTVEY+S    P
Sbjct: 61  RSVLNPFCIVDFAAKIWICPFCFQRNHFPPHYASISDDSLPAELFPQYTTVEYNSDAVGP 120

Query: 117 SDTSPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSGS 176
           ++T P VPPVFLFV+DTCVIEEEIGFLRSA++Q VELLPENSLVGLITFG F HVH  G 
Sbjct: 121 TNT-PSVPPVFLFVVDTCVIEEEIGFLRSALAQAVELLPENSLVGLITFGMFAHVHELG- 178

Query: 177 VLSPKPTFSGAPRTFL 192
                  F   P+T++
Sbjct: 179 -------FGAVPKTYV 187


>Glyma18g00670.1 
          Length = 766

 Score =  218 bits (555), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 105/183 (57%), Positives = 131/183 (71%), Gaps = 1/183 (0%)

Query: 6   DLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRSILN 65
           D E  DGVRM WNV P TK E++  V+P+AA    I+  P +P LPY PLRC+TC S LN
Sbjct: 8   DPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRPHPDIPRLPYAPLRCKTCSSALN 67

Query: 66  PFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSPHVPP 125
           PF  VDF AKIWICPFC+ RNHFPPHY +IS+ NLP EL+P YTTVEY  P   S +  P
Sbjct: 68  PFSRVDFTAKIWICPFCYQRNHFPPHYHAISETNLPGELYPQYTTVEYILPLSNSLNPSP 127

Query: 126 VFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSPKPTF 184
           VFLF++DTC+I+EEI FL+SA+ + + LLP+N+LVG ++FGT V VH  G S +S    F
Sbjct: 128 VFLFLLDTCLIDEEIHFLKSALRRAIGLLPDNALVGFVSFGTQVQVHELGFSDMSKVYVF 187

Query: 185 SGA 187
            G+
Sbjct: 188 RGS 190


>Glyma11g36760.1 
          Length = 767

 Score =  212 bits (539), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 102/183 (55%), Positives = 129/183 (70%), Gaps = 1/183 (0%)

Query: 6   DLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPSMPVLPYTPLRCRTCRSILN 65
           D E  DGVRM WNV P TK E++  V+P+AA    I+  P +P L Y PLRC+TC S LN
Sbjct: 8   DPEGLDGVRMTWNVWPRTKVESSKCVIPLAATVALIRPHPDIPRLQYAPLRCKTCSSALN 67

Query: 66  PFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSPHVPP 125
           PF  VDF AKIWICPFC+ RNHFPPHY +IS+ N P EL+P YTTVEY  P   S +  P
Sbjct: 68  PFSRVDFTAKIWICPFCYQRNHFPPHYHAISETNFPGELYPQYTTVEYLLPLSNSLNPSP 127

Query: 126 VFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVHGSG-SVLSPKPTF 184
           VFLF++DTC+I+EEI FL+SA+ + + LLP+N+LVG ++FGT V V+  G S +S    F
Sbjct: 128 VFLFLLDTCLIDEEIHFLKSALRRAIGLLPDNALVGFVSFGTQVQVYELGFSDMSKVYVF 187

Query: 185 SGA 187
            G+
Sbjct: 188 RGS 190


>Glyma18g00420.1 
          Length = 730

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/169 (42%), Positives = 109/169 (64%), Gaps = 7/169 (4%)

Query: 3   EFVDLESQDGVRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPS-MPVLPYTPLRCRTCR 61
           + V+LE+ +G+R  WN       + TN ++P++ + TP+    S +P+LPY PL C  C 
Sbjct: 2   DLVELEAVEGLRWAWNSWAA---DGTNMIIPLSIMCTPLMLLNSEVPLLPYDPLLCSRCG 58

Query: 62  SILNPFCMVDFVAKIWICPFCFNRNHFPPHYASISDDNLPAELFPHYTTVEYDSPSDTSP 121
           ++LNP+  +D+ ++IW CPFC  RN FP     I+D NLPAELFP Y+TVEY SPS + P
Sbjct: 59  AVLNPYARLDYQSRIWHCPFCSLRNPFP---RPIADTNLPAELFPTYSTVEYSSPSPSPP 115

Query: 122 HVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVH 170
             PP F+F++D    ++E+  L++ +   +  LP++SLV LITF + V+
Sbjct: 116 PPPPAFVFLLDLSTPQDELPPLKNQLLHLLHHLPDHSLVSLITFDSMVY 164


>Glyma03g38830.1 
          Length = 1028

 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFP---SMPVLPYTP---LRCRTCRSILNP 66
           +R+  + +P ++  A+   +P+ A+  P+   P    +P++ + P   +RCR CR+ +NP
Sbjct: 311 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNP 370

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVE+ +P++   
Sbjct: 371 YMTFTEAGRKFRCNICTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMV 430

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +    +     L E      + +G  TF + +H +  
Sbjct: 431 RPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNM 490

Query: 175 GSVLS 179
            S L+
Sbjct: 491 KSSLT 495


>Glyma03g38830.2 
          Length = 903

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFP---SMPVLPYTP---LRCRTCRSILNP 66
           +R+  + +P ++  A+   +P+ A+  P+   P    +P++ + P   +RCR CR+ +NP
Sbjct: 311 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNP 370

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVE+ +P++   
Sbjct: 371 YMTFTEAGRKFRCNICTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMV 430

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +    +     L E      + +G  TF + +H +  
Sbjct: 431 RPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNM 490

Query: 175 GSVLS 179
            S L+
Sbjct: 491 KSSLT 495


>Glyma19g41400.2 
          Length = 1026

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFP---SMPVLPYTP---LRCRTCRSILNP 66
           +R+  + +P ++  A+   +P+ A+  P+   P    +P++ + P   +RCR CR+ +NP
Sbjct: 309 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNP 368

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVE+ +P++   
Sbjct: 369 YMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMV 428

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +    +     L E      + +G  TF + +H +  
Sbjct: 429 RPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNM 488

Query: 175 GSVLS 179
            S L+
Sbjct: 489 KSSLT 493


>Glyma19g41400.1 
          Length = 1026

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFP---SMPVLPYTP---LRCRTCRSILNP 66
           +R+  + +P ++  A+   +P+ A+  P+   P    +P++ + P   +RCR CR+ +NP
Sbjct: 309 LRLTTSAVPSSQSLASRWHLPLGAVVCPLAEPPDGEEVPIVNFAPASVVRCRRCRTYVNP 368

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVE+ +P++   
Sbjct: 369 YMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDINQRPELTKGTVEFVAPAEYMV 428

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +    +     L E      + +G  TF + +H +  
Sbjct: 429 RPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRTQIGFATFDSTIHFYNM 488

Query: 175 GSVLS 179
            S L+
Sbjct: 489 KSSLT 493


>Glyma03g38330.1 
          Length = 871

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 24  KQEATNAVVPVAAIYTPIKHFPSMP-VLPYTPLRCRTCRSILNPFCMVDFVAKIWICPFC 82
           K++A    +   A+ +P +     P V+   P RC++C +  N +C +   +  W C  C
Sbjct: 161 KKQANVPSLGFGALVSPGREVSVGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVIC 220

Query: 83  FNRNHFPPHYASISDDNLPAELFPHYTT--VEYDSPSDTSPHVPPV--------FLFVID 132
              N     Y + S ++L    FP  ++   +Y    +  P   PV         + VID
Sbjct: 221 RKLNGSEGEYIAHSKEDL--HRFPELSSPMFDYVQTGNKRPGFVPVSDSRMSAPIVLVID 278

Query: 133 TCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVH 172
            C+ E  +  L+S++   V+ LP  + +G+I +G  V V+
Sbjct: 279 ECLDEPHLHHLQSSLHAFVDSLPPTTRLGIILYGRTVSVY 318


>Glyma19g40920.1 
          Length = 871

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 24  KQEATNAVVPVAAIYTPIKHFPSMP-VLPYTPLRCRTCRSILNPFCMVDFVAKIWICPFC 82
           K++A    +   A+ +P +     P ++   P RC++C +  N +C +   +  W C  C
Sbjct: 161 KKQANVPSLGFGALVSPGREVSMGPQIIQRDPHRCQSCGAYANIYCNILLGSGQWQCVIC 220

Query: 83  FNRNHFPPHYASISDDNLPAELFPHYTT--VEYDSPSDTSPHVPPV--------FLFVID 132
              N     Y + S ++L    FP  ++   +Y    +  P   PV         + VID
Sbjct: 221 RKLNGSEGEYIAHSKEDL--HRFPELSSPMFDYVQTGNKRPGFVPVSDSRMSAPIVLVID 278

Query: 133 TCVIEEEIGFLRSAVSQPVELLPENSLVGLITFGTFVHVH 172
            C+ E  +  L+S++   V+ LP  + +G+I +G  V V+
Sbjct: 279 ECLDEPHLHHLQSSLHAFVDSLPPITRLGIILYGRTVSVY 318


>Glyma10g28520.1 
          Length = 988

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 18/185 (9%)

Query: 13  VRMPWNVIPGTKQEATNAVVPVAAIYTPIKHFPS---MPVLPYTP---LRCRTCRSILNP 66
           +R+  + IP ++   +   +P+ A+  P+  +P    +P++ +     +RCR C + +NP
Sbjct: 271 LRLTTSAIPISQSLCSRWPLPLGAVVCPLAEYPDGEEVPIVNFAASAVVRCRRCCTYVNP 330

Query: 67  FCMVDFVAKIWICPFCFNRNHFPPHYASISD---DNLPAELFPHYT--TVEYDSPSD--T 119
           +       + + C  C   N  P  Y +  D     +     P  T  TVEY +P D   
Sbjct: 331 YVTFTEGGRKFRCNTCSLLNEVPSEYYAQLDATGRRIDLNQRPELTKGTVEYVAPIDYMV 390

Query: 120 SPHVPPVFLFVIDTCVIEEEIGFLRSAVSQPVELLPE-----NSLVGLITFGTFVHVHGS 174
            P +PPV+ F+ID  +     G +          L E      + +G  TF + +H +  
Sbjct: 391 RPPMPPVYFFLIDVSITAFRSGMIEVVAQTIRSCLDELPGFPRTQIGFATFDSTIHFYNM 450

Query: 175 GSVLS 179
            S L+
Sbjct: 451 KSSLA 455